NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: fca228158d32
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5b/b4474e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/b4474eecd1fc55cb572bc7793c8f31
Native ID: nf-5bb4474eecd1fc55cb572bc7793c8f31-395b5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.3 MB / 4.0 GB
Process I/O (rchar / wchar): 203.2 GB / 13.2 MB
Disk I/O (read / write): 203.1 GB / 1.3 MB
Host: i-0d3240e02cd02299d ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:19 PM
Completed: Feb 03, 2026 6:00:40 PM
Total Duration: 26m 20s

Phases

Queue: 5s
Execution: 18m 39s
Stage/Unstage: 7m 36s

Attempt 1

Execution

Status: failed
Hash: 17/d8b20f
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/d8b20f8583abbddee3488c49797eae
Native ID: nf-17d8b20f8583abbddee3488c49797eae-74ebb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0bfb6eee0753a6db8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:42 PM
Completed: Feb 03, 2026 5:30:31 PM
Total Duration: 16m 48s

Phases

Queue: 59s
Execution: 15m 49s
Stage/Unstage: 0s