NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (1029_BA0-T1-TDNA-1_23FC2GLT4_s20_vs_1029_BA0-N2-BDNA-1_2375WFLT3_s20) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
MSISENSOR2_MSI (1029_BA0-T1-TDNA-1_23FC2GLT4_s20_vs_1029_BA0-N2-BDNA-1_2375WFLT3_s20)

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Task Info

Status: succeeded
Hash: fff432526ac4
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI
Tag: 1029_BA0-T1-TDNA-1_23FC2GLT4_s20_vs_1029_BA0-N2-BDNA-1_2375WFLT3_s20
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: bc/62e393
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/62e393f279fade3513f087345bed6e
Native ID: nf-bc62e393f279fade3513f087345bed6e-85641

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 64
Memory (peak / alloc): 3.8 GB / 128.0 GB
Process I/O (rchar / wchar): 79.0 GB / 2.2 MB
Disk I/O (read / write): 28.6 GB / 3.9 MB
Host: i-08bf791aafc926eab ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:27:46 PM
Completed: Feb 03, 2026 6:07:37 PM
Total Duration: 39m 50s

Phases

Queue: 52s
Execution: 33m 26s
Stage/Unstage: 5m 32s

Attempt 1

Execution

Status: failed
Hash: 05/92571f
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/92571f64cda28983f282e5a26763d3
Native ID: nf-0592571f64cda28983f282e5a26763d3-5a74e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 32
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-026d2e90d220688c1 ( spot)

Runtime

Submitted: Feb 03, 2026 5:19:47 PM
Completed: Feb 03, 2026 5:25:36 PM
Total Duration: 5m 48s

Phases

Queue: 25s
Execution: 5m 23s
Stage/Unstage: 0s