NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 1ee0cff53c08
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 39/dc89de
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/dc89dec956d80480c6667a2a6eb144
Native ID: nf-39dc89dec956d80480c6667a2a6eb144-efa18

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 577.8 MB / 4.0 GB
Process I/O (rchar / wchar): 48.7 GB / 12.2 MB
Disk I/O (read / write): 48.4 GB / 1.2 MB
Host: i-0e599be928e1fc5db ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:59 PM
Completed: Feb 03, 2026 5:42:12 PM
Total Duration: 7m 12s

Phases

Queue: 5s
Execution: 5m 25s
Stage/Unstage: 1m 42s

Attempt 1

Execution

Status: failed
Hash: 0b/a9f6ac
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/a9f6acdb8307446c5053ed8b8743ea
Native ID: nf-0ba9f6acdb8307446c5053ed8b8743ea-5aa64

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 5:23:02 PM
Completed: Feb 03, 2026 5:24:16 PM
Total Duration: -

Phases

Queue: 3019h 13m
Execution: -
Stage/Unstage: -