NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 4a60099a8e7f
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 43/f7159e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/f7159ed038bbab9641490c1cf154d5
Native ID: nf-43f7159ed038bbab9641490c1cf154d5-b9165

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 569.1 MB / 4.0 GB
Process I/O (rchar / wchar): 75.2 GB / 12.6 MB
Disk I/O (read / write): 75.2 GB / 1.3 MB
Host: i-05e988c54a407cdb6 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:57 PM
Completed: Feb 03, 2026 5:45:25 PM
Total Duration: 10m 27s

Phases

Queue: 2s
Execution: 7m 48s
Stage/Unstage: 2m 37s

Attempt 1

Execution

Status: failed
Hash: bb/10e25a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/10e25a0fef3e9e86037c3a473a6dbf
Native ID: nf-bb10e25a0fef3e9e86037c3a473a6dbf-011c6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 5:22:10 PM
Completed: Feb 03, 2026 5:23:42 PM
Total Duration: -

Phases

Queue: 3020h 35m
Execution: -
Stage/Unstage: -