NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30;mutect2) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30;mutect2)

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Task Info

Status: succeeded
Hash: 5362aac5a80c
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30;mutect2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 18/8f3eb5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/8f3eb52957f589d4e525b3a8569519
Native ID: nf-188f3eb52957f589d4e525b3a8569519-7ba06

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 4.9 GB / 16.0 GB
Process I/O (rchar / wchar): 640.5 MB / 13.4 MB
Disk I/O (read / write): 4.0 KB / 10.5 MB
Host: i-036b368e2a91a1cf9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 8:23:27 PM
Completed: Feb 03, 2026 8:24:42 PM
Total Duration: 1m 14s

Phases

Queue: 8s
Execution: 1m 4s
Stage/Unstage: 2s

Attempt 1

Execution

Status: failed
Hash: bb/db67b5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/db67b5819059e10d64e06e48aa72f0
Native ID: nf-bbdb67b5819059e10d64e06e48aa72f0-b36da

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0d4124f399f6c05f1 ( spot)

Runtime

Submitted: Feb 03, 2026 8:21:30 PM
Completed: Feb 03, 2026 8:23:27 PM
Total Duration: -

Phases

Queue: 56s
Execution: -
Stage/Unstage: -