NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BFKM-T1-TDNA-1_23FC2GLT4_s28;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BFKM-T1-TDNA-1_23FC2GLT4_s28;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 55e2d483ceb7
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BFKM-T1-TDNA-1_23FC2GLT4_s28;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 09/b23142
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/b2314238163806cc38692e4f986849
Native ID: nf-09b2314238163806cc38692e4f986849-04584

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 569.3 MB / 4.0 GB
Process I/O (rchar / wchar): 65.1 GB / 12.4 MB
Disk I/O (read / write): 64.9 GB / 1.2 MB
Host: i-0e790618723d11f5a ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:36:09 PM
Completed: Feb 03, 2026 5:46:09 PM
Total Duration: 9m 59s

Phases

Queue: 4s
Execution: 7m 10s
Stage/Unstage: 2m 45s

Attempt 1

Execution

Status: failed
Hash: 88/031865
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/031865fe55cd3b7f846e9cb6820316
Native ID: nf-88031865fe55cd3b7f846e9cb6820316-b87a3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08627d48185b6df0c ( spot)

Runtime

Submitted: Feb 03, 2026 5:23:12 PM
Completed: Feb 03, 2026 5:26:29 PM
Total Duration: -

Phases

Queue: 1m 5s
Execution: -
Stage/Unstage: -