NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_5IX-T1-TDNA-1_23FC2GLT4_s14;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_5IX-T1-TDNA-1_23FC2GLT4_s14;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 5eaa7c419c30
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_5IX-T1-TDNA-1_23FC2GLT4_s14;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 99/43b1f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/43b1f68dbae9631ed64b2ec6cf276e
Native ID: nf-9943b1f68dbae9631ed64b2ec6cf276e-091b3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 569.3 MB / 4.0 GB
Process I/O (rchar / wchar): 48.4 GB / 11.9 MB
Disk I/O (read / write): 48.1 GB / 1.1 MB
Host: i-0ac2b836fddf138ac ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:57 PM
Completed: Feb 03, 2026 5:41:45 PM
Total Duration: 6m 47s

Phases

Queue: 7s
Execution: 5m 3s
Stage/Unstage: 1m 37s

Attempt 1

Execution

Status: failed
Hash: 5b/480836
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/4808362254681bddd7fd5531c957a1
Native ID: nf-5b4808362254681bddd7fd5531c957a1-223f6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 5:22:14 PM
Completed: Feb 03, 2026 5:23:42 PM
Total Duration: -

Phases

Queue: 3019h 13m
Execution: -
Stage/Unstage: -