NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 6f406b633050
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 42/eb8290
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/eb8290ce2fce4c482732d04786675c
Native ID: nf-42eb8290ce2fce4c482732d04786675c-e6b5a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 578.1 MB / 4.0 GB
Process I/O (rchar / wchar): 81.6 GB / 12.8 MB
Disk I/O (read / write): 81.5 GB / 1.3 MB
Host: i-0e599be928e1fc5db ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:59 PM
Completed: Feb 03, 2026 5:48:27 PM
Total Duration: 13m 27s

Phases

Queue: 5s
Execution: 8m 55s
Stage/Unstage: 4m 27s

Attempt 1

Execution

Status: failed
Hash: 1c/ca968a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/ca968ac20ebadfa55e6ee2d1c1db99
Native ID: nf-1cca968ac20ebadfa55e6ee2d1c1db99-34a77

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 5:23:01 PM
Completed: Feb 03, 2026 5:23:48 PM
Total Duration: -

Phases

Queue: 3020h 48m
Execution: -
Stage/Unstage: -