NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_032-N1-BDNA-1_2375WFLT3_s01;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_032-N1-BDNA-1_2375WFLT3_s01;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 7ff086a24084
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_032-N1-BDNA-1_2375WFLT3_s01;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 42/c40c36
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/c40c36c30d7b60f7b83fb2f930c3ed
Native ID: nf-42c40c36c30d7b60f7b83fb2f930c3ed-19a57

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 4
Memory (peak / alloc): 568.9 MB / 4.0 GB
Process I/O (rchar / wchar): 21.3 GB / 11.8 MB
Disk I/O (read / write): 21.1 GB / 1.0 MB
Host: i-071472c81a2474a43 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:32:58 PM
Completed: Feb 03, 2026 5:35:48 PM
Total Duration: 2m 49s

Phases

Queue: 5s
Execution: 2m 3s
Stage/Unstage: 41s

Attempt 1

Execution

Status: failed
Hash: b3/dd9a1d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/dd9a1d8180636b49a09b573dda2d8d
Native ID: nf-b3dd9a1d8180636b49a09b573dda2d8d-2f8fb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-032610caee50f02fb ( spot)

Runtime

Submitted: Feb 03, 2026 5:20:10 PM
Completed: Feb 03, 2026 5:23:02 PM
Total Duration: -

Phases

Queue: 53s
Execution: -
Stage/Unstage: -