NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 983a075c339e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BG5-N1-BDNA-1_2375WFLT3_s29;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 4e/dcba19
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/dcba196696484b692a87be8c0acefe
Native ID: nf-4edcba196696484b692a87be8c0acefe-efc97

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 4
Memory (peak / alloc): 577.0 MB / 4.0 GB
Process I/O (rchar / wchar): 21.7 GB / 11.8 MB
Disk I/O (read / write): 21.7 GB / 1.1 MB
Host: i-011f433568bec7a20 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:33:14 PM
Completed: Feb 03, 2026 5:36:08 PM
Total Duration: 2m 53s

Phases

Queue: 6s
Execution: 2m 7s
Stage/Unstage: 40s

Attempt 1

Execution

Status: failed
Hash: 62/58bf44
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/58bf44f5115cb2c50f20339abc91b2
Native ID: nf-6258bf44f5115cb2c50f20339abc91b2-18029

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0165438e63d482720 ( spot)

Runtime

Submitted: Feb 03, 2026 5:21:12 PM
Completed: Feb 03, 2026 5:23:22 PM
Total Duration: -

Phases

Queue: 1m 11s
Execution: -
Stage/Unstage: -