NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: b1557fd0b6e2
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 65/a84f48
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/a84f48874f9c79265329de3a3fdf3d
Native ID: nf-65a84f48874f9c79265329de3a3fdf3d-da62d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 555.8 MB / 4.0 GB
Process I/O (rchar / wchar): 17.1 GB / 11.6 MB
Disk I/O (read / write): 16.9 GB / 1.0 MB
Host: i-07f33ec765c9720fb ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:33:00 PM
Completed: Feb 03, 2026 5:35:08 PM
Total Duration: 2m 7s

Phases

Queue: 3s
Execution: 1m 36s
Stage/Unstage: 28s

Attempt 1

Execution

Status: failed
Hash: 79/812483
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/81248384aa3f40825b2f9b81f11fb3
Native ID: nf-7981248384aa3f40825b2f9b81f11fb3-20f88

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0442d9afe056546e0 ( spot)

Runtime

Submitted: Feb 03, 2026 5:21:11 PM
Completed: Feb 03, 2026 5:23:21 PM
Total Duration: -

Phases

Queue: 1m 12s
Execution: -
Stage/Unstage: -