NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BBOC-N1-BDNA-1_2375WFLT3_s22;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BBOC-N1-BDNA-1_2375WFLT3_s22;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: ddf0de391a79
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BBOC-N1-BDNA-1_2375WFLT3_s22;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 83/dc5ec3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/dc5ec3206ecfa67c89da196b33a0d9
Native ID: nf-83dc5ec3206ecfa67c89da196b33a0d9-dd966

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 556.6 MB / 4.0 GB
Process I/O (rchar / wchar): 21.0 GB / 11.8 MB
Disk I/O (read / write): 20.7 GB / 1.1 MB
Host: i-0d1b5ecbc7c05a027 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:31:46 PM
Completed: Feb 03, 2026 5:34:34 PM
Total Duration: 2m 47s

Phases

Queue: 5s
Execution: 2m 4s
Stage/Unstage: 38s

Attempt 1

Execution

Status: failed
Hash: 48/8e375f
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/8e375f89455c637df2b770b0f458ec
Native ID: nf-488e375f89455c637df2b770b0f458ec-f6fa1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-040fa3d60f6aae61b ( spot)

Runtime

Submitted: Feb 03, 2026 5:20:52 PM
Completed: Feb 03, 2026 5:22:04 PM
Total Duration: 1m 11s

Phases

Queue: 6s
Execution: 1m 5s
Stage/Unstage: 0s