NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_5IX-N1-BDNA-1_2375WFLT3_s14;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_5IX-N1-BDNA-1_2375WFLT3_s14;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: ebc48bde9d95
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_5IX-N1-BDNA-1_2375WFLT3_s14;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 35/be489d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/be489dbfbb776808372daa9beeec31
Native ID: nf-35be489dbfbb776808372daa9beeec31-8b3d2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 560.2 MB / 4.0 GB
Process I/O (rchar / wchar): 20.0 GB / 11.4 MB
Disk I/O (read / write): 19.7 GB / 1.0 MB
Host: i-0cc9a44ce652ebab9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:30:48 PM
Completed: Feb 03, 2026 5:33:32 PM
Total Duration: 2m 43s

Phases

Queue: 7s
Execution: 1m 59s
Stage/Unstage: 37s

Attempt 1

Execution

Status: failed
Hash: cd/e8b50b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/e8b50b4a4f823149bf0a2fd74e17ff
Native ID: nf-cde8b50b4a4f823149bf0a2fd74e17ff-0a644

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-032610caee50f02fb ( spot)

Runtime

Submitted: Feb 03, 2026 5:20:26 PM
Completed: Feb 03, 2026 5:22:16 PM
Total Duration: -

Phases

Queue: 46s
Execution: -
Stage/Unstage: -