NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_8BO-N1-BDNA-1_2375WFLT3_s18;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_8BO-N1-BDNA-1_2375WFLT3_s18;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: ec223d08b843
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_8BO-N1-BDNA-1_2375WFLT3_s18;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ac/b7ee8f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/b7ee8f55eab1d23870865b328e6453
Native ID: nf-acb7ee8f55eab1d23870865b328e6453-80605

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 4
Memory (peak / alloc): 569.0 MB / 4.0 GB
Process I/O (rchar / wchar): 20.5 GB / 11.8 MB
Disk I/O (read / write): 20.4 GB / 1.1 MB
Host: i-0707e6696b8f209bc ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:32:58 PM
Completed: Feb 03, 2026 5:35:34 PM
Total Duration: 2m 35s

Phases

Queue: 4s
Execution: 1m 56s
Stage/Unstage: 35s

Attempt 1

Execution

Status: failed
Hash: 85/7c49a2
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/7c49a26fe3ed1807dbc1ace0aca82e
Native ID: nf-857c49a26fe3ed1807dbc1ace0aca82e-45ea5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0442d9afe056546e0 ( spot)

Runtime

Submitted: Feb 03, 2026 5:20:46 PM
Completed: Feb 03, 2026 5:23:03 PM
Total Duration: 2m 16s

Phases

Queue: 8s
Execution: 2m 8s
Stage/Unstage: 0s