NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12;mutect2) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
SNPEFF_SNPEFF (1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12;mutect2)

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Task Info

Status: succeeded
Hash: f436cc3c9bd0
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12;mutect2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 86/f940f7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/f940f771d89f244a3b65c0725ea0e8
Native ID: nf-86f940f771d89f244a3b65c0725ea0e8-9660a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 4
Memory (peak / alloc): 4.7 GB / 16.0 GB
Process I/O (rchar / wchar): 641.0 MB / 16.7 MB
Disk I/O (read / write): - / 13.9 MB
Host: i-037a5104dcbb1a111 ( on-demand)

Runtime

Submitted: Feb 03, 2026 8:47:37 PM
Completed: Feb 03, 2026 8:48:55 PM
Total Duration: 1m 17s

Phases

Queue: 9s
Execution: 1m 5s
Stage/Unstage: 3s

Attempt 1

Execution

Status: failed
Hash: 35/3a88cf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/3a88cf8bfd28b003f51dc04ad90a9a
Native ID: nf-353a88cf8bfd28b003f51dc04ad90a9a-0ad8d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 8:46:31 PM
Completed: Feb 03, 2026 8:47:37 PM
Total Duration: -

Phases

Queue: 3015h 39m
Execution: -
Stage/Unstage: -