NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: fc255bfcae9c
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 20/e3d83d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/e3d83d5f188d7c464341bea31a3c79
Native ID: nf-20e3d83d5f188d7c464341bea31a3c79-0901e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 4
Memory (peak / alloc): 569.3 MB / 4.0 GB
Process I/O (rchar / wchar): 20.5 GB / 11.6 MB
Disk I/O (read / write): 20.3 GB / 1.0 MB
Host: i-0c6e26af97ab44100 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:32:59 PM
Completed: Feb 03, 2026 5:35:39 PM
Total Duration: 2m 39s

Phases

Queue: 4s
Execution: 1m 57s
Stage/Unstage: 38s

Attempt 1

Execution

Status: failed
Hash: e3/1748b0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/1748b0d8de8a776210e2daaf3bdc42
Native ID: nf-e31748b0d8de8a776210e2daaf3bdc42-12c1d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0e7a56f80b260ce54 ( spot)

Runtime

Submitted: Feb 03, 2026 5:20:53 PM
Completed: Feb 03, 2026 5:23:15 PM
Total Duration: -

Phases

Queue: 24s
Execution: -
Stage/Unstage: -