NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr) - sarek-tools-sarek-aq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-..aq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: fca228158d32
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_3OH-T1-TDNA-1_23FC2GLT4_s10;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5a/b69fa9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/b69fa9059a2a9d01b2459e2f451480
Native ID: nf-5ab69fa9059a2a9d01b2459e2f451480-950bd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 557.1 MB / 4.0 GB
Process I/O (rchar / wchar): 65.9 GB / 12.4 MB
Disk I/O (read / write): 65.7 GB / 1.2 MB
Host: i-0e426b97d9d3d62eb ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:36:09 PM
Completed: Feb 03, 2026 5:45:43 PM
Total Duration: 9m 33s

Phases

Queue: 4s
Execution: 6m 58s
Stage/Unstage: 2m 31s

Attempt 1

Execution

Status: failed
Hash: 86/77008d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/77008d4880f9815a8c11b881e2557d
Native ID: nf-8677008d4880f9815a8c11b881e2557d-678c2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08627d48185b6df0c ( spot)

Runtime

Submitted: Feb 03, 2026 5:22:00 PM
Completed: Feb 03, 2026 5:26:24 PM
Total Duration: -

Phases

Queue: 35s
Execution: -
Stage/Unstage: -