File Info

Filename
1029_2RG.csv
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/49df6b36c80556637bcc13e641ab4f/1029_2RG.csv
Size
23.5 KB
Task
PROCESS_VARIANTS (1029_2RG)
Attempt

Content

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specimen chrom pos ref alt FILTER tumor_genotype tumor_vaf tumor_num_alt_reads in_panel_of_normals in_panel_of_tumors boost_status
1029_2RG chr1 2450766 G A PASS 0|1 0.095400 46 False False .
1029_2RG chr1 9671934 C T PASS 0/1 0.007870 9 False False NONBOOSTED
1029_2RG chr1 17570671 A G PASS 0/1 0.014500 7 False False NONBOOSTED
1029_2RG chr1 32202221 C T PASS 0/1 0.137000 106 False False NONBOOSTED
1029_2RG chr1 43779543 C A PASS 0|1 0.105000 86 False False NONBOOSTED
1029_2RG chr1 51032888 T C PASS 0/1 0.180000 30 False False NONBOOSTED
1029_2RG chr1 53701277 T C PASS 0/1 0.198000 34 False False NONBOOSTED
1029_2RG chr1 70300609 C A PASS 0/1 0.163000 25 False False .
1029_2RG chr1 85725326 G A PASS 0/1 0.011000 13 False False .
1029_2RG chr1 90399657 G A PASS 0/1 0.153000 185 False False NONBOOSTED
1029_2RG chr1 93160922 A C PASS 0|1 0.182000 71 False False NONBOOSTED
1029_2RG chr1 111773332 G C PASS 0/1 0.159000 41 False False .
1029_2RG chr1 112246081 G A PASS 0/1 0.024800 11 False False NONBOOSTED
1029_2RG chr1 113253919 T A PASS 0/1 0.014800 8 False False NONBOOSTED
1029_2RG chr1 114944110 C A PASS 0/1 0.179000 51 False False .
1029_2RG chr1 151400804 C T PASS 0/1 0.136000 184 False False NONBOOSTED
1029_2RG chr1 153948286 G A PASS 0/1 0.117000 35 False False .
1029_2RG chr1 154473936 G T PASS 0/1 0.118000 93 False False NONBOOSTED
1029_2RG chr1 157801779 T A PASS 0/1 0.133000 36 False False .
1029_2RG chr1 158687492 G T PASS 0/1 0.154000 162 False False NONBOOSTED
1029_2RG chr1 160143973 C A PASS 0/1 0.140000 133 False False NONBOOSTED
1029_2RG chr1 169838190 A T PASS 0/1 0.147000 105 False False .
1029_2RG chr1 171077001 T A PASS 0|1 0.168000 51 False False .
1029_2RG chr1 175956257 T C PASS 0/1 0.147000 125 False False .
1029_2RG chr1 176759045 T C PASS 0/1 0.143000 127 False False NONBOOSTED
1029_2RG chr1 177030447 C G PASS 0/1 0.145000 55 False False .
1029_2RG chr1 178855213 G A PASS 0/1 0.139000 59 False False NONBOOSTED
1029_2RG chr1 196953004 C T PASS 0/1 0.250000 14 False False .
1029_2RG chr1 200870200 A G PASS 0|1 0.019500 11 False False NONBOOSTED
1029_2RG chr1 200870206 C A PASS 0|1 0.019100 11 False False NONBOOSTED
1029_2RG chr1 205643340 G A PASS 0|1 0.151000 529 False False .
1029_2RG chr1 210273655 T C PASS 0/1 0.153000 70 False False NONBOOSTED
1029_2RG chr1 228547322 G A PASS 0/1 0.100000 72 False False NONBOOSTED
1029_2RG chr1 231299135 G A PASS 0/1 0.011900 8 False False NONBOOSTED
1029_2RG chr1 237817671 C T PASS 0/1 0.127000 53 False False NONBOOSTED
1029_2RG chr1 244013053 C G PASS 0|1 0.139000 338 False False .
1029_2RG chr1 247614785 G T PASS 0/1 0.162000 201 False False NONBOOSTED
1029_2RG chr1 248059850 C A PASS 0/1 0.154000 78 False False .
1029_2RG chr1 248436715 C A PASS 0|1 0.108000 428 False False NONBOOSTED
1029_2RG chr1 248512677 G T PASS 0/1 0.143000 157 False False NONBOOSTED
1029_2RG chr2 26688714 G T PASS 0/1 0.159000 116 False False .
1029_2RG chr2 27429283 T A PASS 0/1 0.148000 68 False False .
1029_2RG chr2 31409336 C A PASS 0/1 0.161000 33 False False NONBOOSTED
1029_2RG chr2 40405480 C A PASS 0/1 0.127000 59 False False .
1029_2RG chr2 46770156 G A PASS 0|1 0.029800 16 False False .
1029_2RG chr2 46770177 G T PASS 0|1 0.022300 16 False False .
1029_2RG chr2 46770200 C T PASS 0|1 0.018000 16 False False NONBOOSTED
1029_2RG chr2 61010437 G A PASS 0|1 0.163000 38 False False .
1029_2RG chr2 61149826 C G PASS 0|1 0.006770 16 False False .
1029_2RG chr2 71059954 G T PASS 0/1 0.144000 38 False False .
1029_2RG chr2 73650132 C T PASS 0|1 0.182000 31 False False .
1029_2RG chr2 79384804 T A PASS 0/1 0.154000 163 False False NONBOOSTED
1029_2RG chr2 85554121 G C PASS 0|1 0.121000 164 False False NONBOOSTED
1029_2RG chr2 87016940 C A PASS 0/1 0.156000 14 False False .
1029_2RG chr2 88485435 C T PASS 0/1 0.017600 13 False False NONBOOSTED
1029_2RG chr2 122161367 A C PASS 0/1 0.122000 66 False False .
1029_2RG chr2 141643824 G T PASS 0/1 0.147000 176 False False BOOSTED
1029_2RG chr2 151343108 G A PASS 0|1 0.102000 18 False False .
1029_2RG chr2 152387600 C A PASS 0|1 0.012300 12 False False NONBOOSTED
1029_2RG chr2 166893077 C A PASS 0/1 0.159000 16 False False .
1029_2RG chr2 168115323 C T PASS 0|1 0.011400 9 False False NONBOOSTED
1029_2RG chr2 219557038 G A PASS 0/1 0.010600 6 False False .
1029_2RG chr2 224462280 G A PASS 1|0 0.155000 137 False False NONBOOSTED
1029_2RG chr2 224642409 T A PASS 0/1 0.138000 46 False False NONBOOSTED
1029_2RG chr2 224849678 C G PASS 0/1 0.123000 57 False False .
1029_2RG chr3 3030252 C T PASS 0|1 0.107000 8 False False .
1029_2RG chr3 7503201 C A PASS 0|1 0.136000 43 False False .
1029_2RG chr3 7503202 C T PASS 0|1 0.136000 43 False False .
1029_2RG chr3 27353536 C A PASS 0/1 0.144000 55 False False .
1029_2RG chr3 44701322 C T PASS 0|1 0.173000 124 False False NONBOOSTED
1029_2RG chr3 51994183 G T PASS 0|1 0.015400 6 False False .
1029_2RG chr3 69435072 C T PASS 0/1 0.013800 10 False False NONBOOSTED
1029_2RG chr3 74351819 C A PASS 0/1 0.173000 23 False False .
1029_2RG chr3 89157040 C T PASS 0/1 0.010300 31 False False .
1029_2RG chr3 142280157 C T PASS 0/1 0.170000 220 False False BOOSTED
1029_2RG chr3 151102017 G C PASS 0/1 0.152000 49 False False .
1029_2RG chr3 157817806 T A PASS 0/1 0.132000 20 False False .
1029_2RG chr4 997026 C G PASS 0|1 0.166000 64 False False .
1029_2RG chr4 2461887 C A PASS 1|0 0.170000 135 False False NONBOOSTED
1029_2RG chr4 2461888 A G PASS 1|0 0.170000 135 True False NONBOOSTED
1029_2RG chr4 15717506 C T PASS 0/1 0.157000 25 False False .
1029_2RG chr4 20600065 G A PASS 0/1 0.008190 16 False False .
1029_2RG chr4 39104987 T C PASS 0/1 0.064700 46 False False NONBOOSTED
1029_2RG chr4 48136234 C A PASS 0/1 0.140000 46 False False .
1029_2RG chr4 55968507 G T PASS 0/1 0.156000 238 False False .
1029_2RG chr4 66231763 C A PASS 0/1 0.150000 144 False False BOOSTED
1029_2RG chr4 69101762 C A PASS 0/1 0.127000 30 False False NONBOOSTED
1029_2RG chr4 70596255 C G PASS 0/1 0.142000 40 False False NONBOOSTED
1029_2RG chr4 79350222 G C PASS 0|1 0.007670 30 False False .
1029_2RG chr4 140282988 G T PASS 0/1 0.141000 41 False False NONBOOSTED
1029_2RG chr4 141555345 G C PASS 0/1 0.196000 125 False False .
1029_2RG chr4 144617557 G T PASS 0|1 0.026800 14 False False NONBOOSTED
1029_2RG chr4 151826997 G A PASS 0|1 0.111000 22 False False NONBOOSTED
1029_2RG chr4 151827028 G A PASS 0|1 0.108000 31 False False NONBOOSTED
1029_2RG chr4 152020928 C T PASS 0/1 0.198000 85 False False .
1029_2RG chr4 177609112 G T PASS 0/1 0.128000 70 False False .
1029_2RG chr4 183650018 C T PASS 0/1 0.180000 23 False False .
1029_2RG chr5 1053497 C A PASS 0/1 0.108000 155 False False NONBOOSTED
1029_2RG chr5 10988162 C A PASS 0/1 0.282000 134 False False .
1029_2RG chr5 19747252 C G PASS 0/1 0.250000 198 False False NONBOOSTED
1029_2RG chr5 40998790 T G PASS 0/1 0.094900 25 False False .
1029_2RG chr5 43122179 A G PASS 0/1 0.041700 37 False False NONBOOSTED
1029_2RG chr5 79732490 A T PASS 0/1 0.079900 5 False False .
1029_2RG chr5 82835744 G T PASS 1|0 0.160000 116 False False NONBOOSTED
1029_2RG chr5 133914443 G A PASS 0|1 0.015400 16 False False NONBOOSTED
1029_2RG chr5 140579923 C T PASS 0/1 0.147000 163 False False NONBOOSTED
1029_2RG chr5 141052402 G A PASS 0/1 0.012800 13 False False NONBOOSTED
1029_2RG chr5 176707605 G C PASS 0/1 0.127000 309 False False BOOSTED
1029_2RG chr5 178039474 C T PASS 0/1 0.090600 28 False False NONBOOSTED
1029_2RG chr6 28547237 T C PASS 0/1 0.230000 27 False False .
1029_2RG chr6 30670829 T C PASS 0/1 0.165000 101 False False .
1029_2RG chr6 35254269 G T PASS 0/1 0.148000 34 False False .
1029_2RG chr6 53516997 G A PASS 0/1 0.017900 18 False False NONBOOSTED
1029_2RG chr6 56401599 C A PASS 0/1 0.139000 78 False False NONBOOSTED
1029_2RG chr6 70951757 G T PASS 0|1 0.277000 165 False False .
1029_2RG chr6 70951761 C G PASS 0|1 0.280000 158 False False .
1029_2RG chr6 76022827 G A PASS 0/1 0.138000 172 False False NONBOOSTED
1029_2RG chr6 76751543 C T PASS 0/1 0.201000 16 False False .
1029_2RG chr6 82461797 A G PASS 0/1 0.005840 10 False False NONBOOSTED
1029_2RG chr6 83849893 G A PASS 0/1 0.022900 6 False False .
1029_2RG chr6 106534266 G A PASS 0/1 0.133000 555 False False .
1029_2RG chr6 116720375 G T PASS 0/1 0.138000 86 False False NONBOOSTED
1029_2RG chr6 117645502 C T PASS 0|1 0.145000 251 False False BOOSTED
1029_2RG chr6 128320050 C T PASS 0/1 0.141000 64 False False .
1029_2RG chr6 147055154 G A PASS 0/1 0.144000 45 False False NONBOOSTED
1029_2RG chr6 152446650 C A PASS 0/1 0.154000 476 False False .
1029_2RG chr6 159646784 C T PASS 0/1 0.139000 65 False False .
1029_2RG chr6 160199936 G A PASS 0/1 0.013000 7 False False .
1029_2RG chr6 165832211 G A PASS 0|1 0.131000 55 False False NONBOOSTED
1029_2RG chr6 170594293 C A PASS 0/1 0.133000 95 False False .
1029_2RG chr7 23552631 C T PASS 0/1 0.014400 7 False False NONBOOSTED
1029_2RG chr7 76984632 A C PASS 0/1 0.158000 163 False False NONBOOSTED
1029_2RG chr7 102109183 G C PASS 0/1 0.017100 5 False False .
1029_2RG chr7 103214578 C G PASS 0/1 0.132000 107 False False NONBOOSTED
1029_2RG chr7 121741793 G A PASS 0/1 0.036300 7 False False .
1029_2RG chr7 123517139 C T PASS 0|1 0.155000 126 False False NONBOOSTED
1029_2RG chr7 141336780 T C PASS 0/1 0.123000 23 False False NONBOOSTED
1029_2RG chr7 142919612 G T PASS 0/1 0.022100 26 False False NONBOOSTED
1029_2RG chr8 6385223 A G PASS 0/1 0.172000 42 False False .
1029_2RG chr8 11188583 G C PASS 0|1 0.027400 35 False False .
1029_2RG chr8 12598398 C T PASS 0/1 0.131000 71 False False NONBOOSTED
1029_2RG chr8 22885305 C A PASS 0|1 0.128000 39 False False .
1029_2RG chr8 26372132 G T PASS 0/1 0.165000 125 False False NONBOOSTED
1029_2RG chr8 31491901 C T PASS 0/1 0.169000 163 False False .
1029_2RG chr8 32537640 C T PASS 0/1 0.165000 389 False False .
1029_2RG chr8 32609801 C A PASS 0/1 0.142000 794 False False .
1029_2RG chr8 69145133 G A PASS 0|1 0.008830 7 False False .
1029_2RG chr8 73921239 G A PASS 0/1 0.119000 106 False False NONBOOSTED
1029_2RG chr8 95419865 C A PASS 0/1 0.143000 47 False False NONBOOSTED
1029_2RG chr8 95419866 C G PASS 0/1 0.143000 47 False False NONBOOSTED
1029_2RG chr8 95778866 G A PASS 1|0 0.130000 55 False False NONBOOSTED
1029_2RG chr8 100994068 G A PASS 0/1 0.161000 22 False False .
1029_2RG chr8 114111114 T A PASS 0/1 0.018400 6 False False NONBOOSTED
1029_2RG chr8 139606337 C A PASS 0/1 0.162000 130 False False NONBOOSTED
1029_2RG chr8 144295912 C G PASS 0/1 0.213000 15 False False .
1029_2RG chr8 146033154 G A PASS 0/1 0.007580 11 False False NONBOOSTED
1029_2RG chr9 40700358 C A PASS 0/1 0.148000 208 False False NONBOOSTED
1029_2RG chr9 87520437 C A PASS 0/1 0.183000 540 False False .
1029_2RG chr9 94487179 G A PASS 0|1 0.016400 7 False False NONBOOSTED
1029_2RG chr9 97873496 G A PASS 0/1 0.008410 33 False False BOOSTED
1029_2RG chr9 130428410 G C PASS 0/1 0.175000 44 False False .
1029_2RG chr9 131467871 C G PASS 0/1 0.174000 49 False False .
1029_2RG chr9 131514996 C T PASS 0/1 0.015400 8 False False NONBOOSTED
1029_2RG chr9 133298109 C T PASS 0/1 0.133000 57 False False NONBOOSTED
1029_2RG chr9 133509965 G A PASS 0/1 0.206000 33 False False .
1029_2RG chr9 139397646 C A PASS 0/1 0.176000 403 False False BOOSTED
1029_2RG chr10 12202915 C T PASS 0/1 0.156000 58 False False .
1029_2RG chr10 14709549 G A PASS 0/1 0.179000 33 False False .
1029_2RG chr10 14976852 A T PASS 0|1 0.233000 22 False False .
1029_2RG chr10 20500688 G A PASS 0|1 0.119000 38 False False .
1029_2RG chr10 31815605 A G PASS 0/1 0.011000 6 False False NONBOOSTED
1029_2RG chr10 49985096 A T PASS 0/1 0.157000 46 False False .
1029_2RG chr10 61023950 G T PASS 0/1 0.145000 37 False False .
1029_2RG chr10 73767783 G A PASS 0/1 0.135000 92 False False NONBOOSTED
1029_2RG chr10 75148084 G A PASS 0/1 0.159000 107 False False NONBOOSTED
1029_2RG chr10 75156326 C T PASS 0/1 0.136000 25 False False NONBOOSTED
1029_2RG chr10 81067290 G A PASS 0/1 0.124000 104 False False NONBOOSTED
1029_2RG chr10 88705072 G T PASS 0/1 0.136000 71 False False .
1029_2RG chr10 95353625 C G PASS 0/1 0.018300 21 False False NONBOOSTED
1029_2RG chr10 99079807 G T PASS 0/1 0.117000 110 False False NONBOOSTED
1029_2RG chr10 104176828 G A PASS 0/1 0.150000 67 False False .
1029_2RG chr10 105128017 C T PASS 0/1 0.151000 105 False False NONBOOSTED
1029_2RG chr10 108447993 G T PASS 0/1 0.128000 126 False False NONBOOSTED
1029_2RG chr10 135051501 G T PASS 0/1 0.175000 74 False False NONBOOSTED
1029_2RG chr11 695838 C T PASS 0|1 0.155000 80 False False NONBOOSTED
1029_2RG chr11 7110726 C A PASS 0|1 0.171000 120 False False NONBOOSTED
1029_2RG chr11 13032475 C G PASS 0/1 0.168000 133 False False NONBOOSTED
1029_2RG chr11 14496105 G A PASS 0/1 0.118000 92 False False NONBOOSTED
1029_2RG chr11 22284574 A G PASS 0/1 0.145000 13 False False NONBOOSTED
1029_2RG chr11 31823479 C G PASS 0/1 0.014900 5 False False .
1029_2RG chr11 36297828 C G PASS 0/1 0.129000 70 False False .
1029_2RG chr11 36595896 C T PASS 0/1 0.013700 16 False False NONBOOSTED
1029_2RG chr11 55419172 G T PASS 0/1 0.134000 165 False False NONBOOSTED
1029_2RG chr11 56114503 T A PASS 0/1 0.029800 6 False False .
1029_2RG chr11 59132702 C T PASS 0/1 0.183000 85 False False NONBOOSTED
1029_2RG chr11 60774934 G T PASS 0/1 0.178000 20 False False .
1029_2RG chr11 61313660 G T PASS 0/1 0.129000 87 False False NONBOOSTED
1029_2RG chr11 62363388 A G PASS 0/1 0.008270 7 False False .
1029_2RG chr11 62434355 G A PASS 0|1 0.016700 14 False False NONBOOSTED
1029_2RG chr11 76895565 T C PASS 0/1 0.173000 35 False False .
1029_2RG chr11 76900337 G T PASS 0/1 0.153000 22 False False .
1029_2RG chr11 101000113 G A PASS 0/1 0.141000 693 False False .
1029_2RG chr11 101347198 C G PASS 0/1 0.159000 60 False False NONBOOSTED
1029_2RG chr11 105795275 C G PASS 0/1 0.012000 7 False False NONBOOSTED
1029_2RG chr11 119230170 A G PASS 0/1 0.187000 77 False False .
1029_2RG chr12 6637550 G C PASS 0/1 0.018800 7 False False .
1029_2RG chr12 7970578 A T PASS 0|1 0.156000 188 False False NONBOOSTED
1029_2RG chr12 13364367 C A PASS 0/1 0.198000 23 False False .
1029_2RG chr12 21229503 G T PASS 0/1 0.104000 16 False False NONBOOSTED
1029_2RG chr12 25398285 C A PASS 0/1 0.137000 298 False False BOOSTED
1029_2RG chr12 40916544 C G PASS 0/1 0.123000 24 False False .
1029_2RG chr12 49919927 G T PASS 0/1 0.128000 75 False False NONBOOSTED
1029_2RG chr12 51133289 G C PASS 0/1 0.009180 7 False False NONBOOSTED
1029_2RG chr12 57398576 C A PASS 0|1 0.135000 77 False False NONBOOSTED
1029_2RG chr12 58146179 A G PASS 0/1 0.135000 540 False False .
1029_2RG chr12 78520937 G T PASS 0/1 0.123000 11 False False .
1029_2RG chr12 89818934 C A PASS 0/1 0.130000 54 False False .
1029_2RG chr13 21565617 C T PASS 0/1 0.139000 219 False False .
1029_2RG chr13 32757256 G A PASS 0/1 0.143000 21 False False .
1029_2RG chr13 42740667 A G PASS 0/1 0.138000 21 False False NONBOOSTED
1029_2RG chr13 43537346 A G PASS 0/1 0.132000 22 False False .
1029_2RG chr13 60548646 T C PASS 0/1 0.144000 13 False False .
1029_2RG chr13 102367744 T C PASS 0/1 0.148000 344 False False .
1029_2RG chr14 24769205 C T PASS 0|1 0.015900 8 False False NONBOOSTED
1029_2RG chr14 72197080 G T PASS 0/1 0.225000 60 False False .
1029_2RG chr14 73751112 A T PASS 0/1 0.271000 52 False False .
1029_2RG chr14 74756172 G A PASS 0/1 0.137000 55 False False .
1029_2RG chr14 79117541 A T PASS 0|1 0.178000 168 False False NONBOOSTED
1029_2RG chr14 95554010 G A PASS 0/1 0.005420 18 False False .
1029_2RG chr14 105409241 T C PASS 0|1 0.010900 9 False False NONBOOSTED
1029_2RG chr14 105455277 C A PASS 0/1 0.169000 25 False False .
1029_2RG chr14 105849904 G C PASS 0/1 0.132000 43 False False .
1029_2RG chr15 28357272 A G PASS 0|1 0.146000 66 False False .
1029_2RG chr15 31269250 G A PASS 0/1 0.185000 9 False False .
1029_2RG chr15 42061658 G A PASS 0/1 0.145000 344 False False .
1029_2RG chr15 42732014 G A PASS 0/1 0.021500 9 False False .
1029_2RG chr15 43748846 C T PASS 0|1 0.005010 20 False False BOOSTED
1029_2RG chr15 45009978 G A PASS 0/1 0.133000 244 False False .
1029_2RG chr15 50540528 G T PASS 0/1 0.137000 59 False False NONBOOSTED
1029_2RG chr15 50833282 T A PASS 0/1 0.148000 68 False False NONBOOSTED
1029_2RG chr15 55789940 C T PASS 1|0 0.145000 56 False False NONBOOSTED
1029_2RG chr15 65214280 C T PASS 0/1 0.161000 40 False False .
1029_2RG chr15 76205632 G T PASS 0/1 0.139000 29 False False .
1029_2RG chr15 88408302 T A PASS 0/1 0.149000 424 False False .
1029_2RG chr15 88414400 A T PASS 0/1 0.153000 501 False False .
1029_2RG chr15 88484182 C T PASS 0|1 0.005030 20 False False .
1029_2RG chr15 88484498 A T PASS 0/1 0.154000 513 False False .
1029_2RG chr15 89392834 G A PASS 0/1 0.150000 71 False False NONBOOSTED
1029_2RG chr16 402605 C G PASS 0|1 0.137000 437 False False .
1029_2RG chr16 402649 C T PASS 0|1 0.132000 417 False False .
1029_2RG chr16 837702 C T PASS 0/1 0.014800 6 False False NONBOOSTED
1029_2RG chr16 2273594 C T PASS 0/1 0.018400 7 False False .
1029_2RG chr16 2980729 C A PASS 0/1 0.186000 84 False False NONBOOSTED
1029_2RG chr16 3659016 G A PASS 0|1 0.013300 21 False False .
1029_2RG chr16 4924158 C T PASS 0/1 0.161000 60 False False .
1029_2RG chr16 20334755 G T PASS 0/1 0.227000 32 False False .
1029_2RG chr16 23718177 T G PASS 0/1 0.047600 18 False False NONBOOSTED
1029_2RG chr16 28493821 C T PASS 0/1 0.147000 149 False False NONBOOSTED
1029_2RG chr16 28846640 C T PASS 0/1 0.137000 95 False False NONBOOSTED
1029_2RG chr16 28922206 C T PASS 0/1 0.019000 10 False False .
1029_2RG chr16 30582867 G A PASS 0/1 0.013600 8 False False NONBOOSTED
1029_2RG chr16 67848370 G A PASS 0/1 0.122000 25 False False .
1029_2RG chr16 69364822 G T PASS 0/1 0.013600 11 False False NONBOOSTED
1029_2RG chr16 70162609 C T PASS 0/1 0.054000 12 False False .
1029_2RG chr16 77232029 A C PASS 0/1 0.107000 68 False False NONBOOSTED
1029_2RG chr16 81965160 G T PASS 0/1 0.144000 517 False False BOOSTED
1029_2RG chr16 89016934 G A PASS 0|1 0.016700 12 False False NONBOOSTED
1029_2RG chr16 89016937 A T PASS 0|1 0.016600 12 False False NONBOOSTED
1029_2RG chr16 89353642 G A PASS 0/1 0.145000 747 False False .
1029_2RG chr17 8638827 C T PASS 0|1 0.006460 11 False False NONBOOSTED
1029_2RG chr17 9808171 G T PASS 0/1 0.147000 126 False False NONBOOSTED
1029_2RG chr17 10441019 C A PASS 0/1 0.130000 195 False False NONBOOSTED
1029_2RG chr17 10543742 C A PASS 0|1 0.137000 123 False False NONBOOSTED
1029_2RG chr17 16119035 G A PASS 0|1 0.153000 557 False False .
1029_2RG chr17 16594140 G T PASS 0/1 0.181000 46 False False .
1029_2RG chr17 17701161 T C PASS 0/1 0.120000 68 False False NONBOOSTED
1029_2RG chr17 18661820 T A PASS 0/1 0.088300 133 False False .
1029_2RG chr17 21146659 G A PASS 0/1 0.133000 79 False False NONBOOSTED
1029_2RG chr17 25972868 C T PASS 0/1 0.112000 36 False False .
1029_2RG chr17 37339978 G A PASS 0/1 0.017900 19 False False NONBOOSTED
1029_2RG chr17 38545710 G A PASS 0/1 0.137000 215 False False .
1029_2RG chr17 38634961 C T PASS 0/1 0.099800 23 False False .
1029_2RG chr17 42170919 G C PASS 0|1 0.012300 11 False False .
1029_2RG chr17 42457056 C T PASS 0/1 0.011200 6 False False .
1029_2RG chr17 45901740 T C PASS 0/1 0.014100 6 False False NONBOOSTED
1029_2RG chr17 46674099 G T PASS 0|1 0.152000 25 False False .
1029_2RG chr17 48141549 G T PASS 0/1 0.121000 60 False False NONBOOSTED
1029_2RG chr17 49726475 C A PASS 0/1 0.187000 51 False False .
1029_2RG chr17 53076868 A T PASS 0|1 0.171000 29 False False .
1029_2RG chr17 57232437 G A PASS 0/1 0.130000 134 False False NONBOOSTED
1029_2RG chr17 73945761 C A PASS 0/1 0.146000 131 False False .
1029_2RG chr17 74625430 T A PASS 0|1 0.173000 151 False False NONBOOSTED
1029_2RG chr18 45395758 C T PASS 0/1 0.103000 199 False False BOOSTED
1029_2RG chr18 47799327 T C PASS 0/1 0.139000 97 False False .
1029_2RG chr18 56416799 C G PASS 0/1 0.006880 29 False False .
1029_2RG chr18 61308230 G T PASS 0/1 0.091000 49 False False .
1029_2RG chr18 67833316 G A PASS 0/1 0.144000 81 False False NONBOOSTED
1029_2RG chr19 929945 G C PASS 0/1 0.115000 32 False False .
1029_2RG chr19 4053917 G A PASS 0/1 0.150000 116 False False .
1029_2RG chr19 4352806 G A PASS 0|1 0.178000 71 False False .
1029_2RG chr19 9049199 A T PASS 0|1 0.141000 495 False False BOOSTED
1029_2RG chr19 9091476 G T PASS 0|1 0.156000 460 False False BOOSTED
1029_2RG chr19 9091477 G T PASS 0|1 0.156000 460 False False BOOSTED
1029_2RG chr19 13346018 C T PASS 0/1 0.014700 6 False False .
1029_2RG chr19 15366021 G A PASS 0|1 0.011400 10 False False .
1029_2RG chr19 16859944 T A PASS 0/1 0.162000 118 False False .
1029_2RG chr19 17010282 G C PASS 0/1 0.169000 38 False False .
1029_2RG chr19 17014745 C T PASS 0/1 0.156000 22 False False .
1029_2RG chr19 17581367 G A PASS 0/1 0.133000 122 False False NONBOOSTED
1029_2RG chr19 18120435 G T PASS 0/1 0.104000 41 False False NONBOOSTED
1029_2RG chr19 18278168 C T PASS 0/1 0.008930 17 False False .
1029_2RG chr19 19033507 G A PASS 0/1 0.011300 7 False False NONBOOSTED
1029_2RG chr19 22836773 A G PASS 0/1 0.167000 39 False False NONBOOSTED
1029_2RG chr19 23032008 G A PASS 0/1 0.158000 26 False False NONBOOSTED
1029_2RG chr19 33182970 G A PASS 0/1 0.164000 107 False False NONBOOSTED
1029_2RG chr19 41120319 G T PASS 0/1 0.113000 48 False False NONBOOSTED
1029_2RG chr19 42503134 G T PASS 0/1 0.154000 39 False False NONBOOSTED
1029_2RG chr19 42848077 T C PASS 0/1 0.012800 5 False False .
1029_2RG chr19 43415100 C T PASS 0/1 0.120000 23 False False .
1029_2RG chr19 49902690 T C PASS 0/1 0.167000 42 False False .
1029_2RG chr19 54496106 C G PASS 0/1 0.196000 24 False False .
1029_2RG chr19 56934593 A C PASS 0/1 0.161000 82 False False NONBOOSTED
1029_2RG chr20 16730661 C A PASS 0|1 0.010300 8 False False .
1029_2RG chr20 21196327 A G PASS 0|1 0.174000 47 False False .
1029_2RG chr20 21377251 C T PASS 0|1 0.157000 65 False False .
1029_2RG chr20 31376815 C T PASS 0/1 0.006970 17 False False BOOSTED
1029_2RG chr20 37272453 G T PASS 0/1 0.014600 9 False False NONBOOSTED
1029_2RG chr20 37546898 G T PASS 0/1 0.156000 168 False False NONBOOSTED
1029_2RG chr20 44663629 C A PASS 0/1 0.142000 79 False False NONBOOSTED
1029_2RG chr20 60498703 C A PASS 0/1 0.139000 97 False False NONBOOSTED
1029_2RG chr20 60509224 C A PASS 0|1 0.183000 136 False False NONBOOSTED
1029_2RG chr20 61834008 C T PASS 0|1 0.060600 59 False False NONBOOSTED
1029_2RG chr20 62038317 G A PASS 0|1 0.131000 64 False False NONBOOSTED
1029_2RG chr21 46310088 G A PASS 0/1 0.155000 339 False False NONBOOSTED
1029_2RG chr22 22712511 C G PASS 1|0 0.142000 630 False False .
1029_2RG chr22 25297909 G A PASS 0|1 0.140000 181 False False NONBOOSTED
1029_2RG chr22 25297927 G A PASS 0|1 0.005890 8 False False .
1029_2RG chr22 38109224 T C PASS 0/1 0.014600 5 False False NONBOOSTED
1029_2RG chr22 38121625 G A PASS 0|1 0.133000 101 False False NONBOOSTED
1029_2RG chr22 45798145 C T PASS 0/1 0.142000 16 False False .
1029_2RG chrX 2867749 G A PASS 0/1 0.048200 26 False False NONBOOSTED
1029_2RG chrX 34148766 G A PASS 0/1 0.276000 261 False False NONBOOSTED
1029_2RG chrX 46322756 G T PASS 0/1 0.302000 93 False False .
1029_2RG chrX 47004077 A G PASS 0/1 0.272000 85 False False NONBOOSTED
1029_2RG chrX 47039342 C T PASS 0/1 0.307000 491 False False BOOSTED
1029_2RG chrX 68060233 G T PASS 0/1 0.300000 130 False False NONBOOSTED
1029_2RG chrX 85236799 C A PASS 0/1 0.258000 48 False False NONBOOSTED
1029_2RG chrX 105278388 G A PASS 0|1 0.239000 52 False False .
1029_2RG chrX 147744155 C T PASS 0/1 0.269000 190 False False NONBOOSTED
1029_2RG chrX 151821304 G A PASS 0|1 0.068000 33 False False NONBOOSTED
351 rows