File Info

Filename
1029_0NX.summary.json
Full Path
s3://natera-platform-sandbox/platform-users/sgreer/projects/A15_hmz_test/signatera/1029_0NX/1029_0NX.summary.json
Size
2.6 KB
Published
Mar 01, 2026 11:58 AM
{
  "sequencing_library_id": "1029_0NX",
  "secondary_sequencing_library_id": null,
  "data_source": "signatera",
  "harmonized_software_version": "198bb41c7021831bbb85b464458aae3d09416b97",
  "software_version": null,
  "harmonized_s3_path": "s3://natera-platform-sandbox/platform-users/sgreer/projects/A15_hmz_test/signatera",
  "s3_path": "s3://natera-platform-sandbox/platform_projects/DSPE-1029/1029/1029_0NX/",
  "s3_path_params": null,
  "s3_path_qc": null,
  "altera_exact_report_details": null,
  "qc": {
    "calculated_sex": null,
    "calculated_sex_secondary": null,
    "tumor_normal_correlation": null,
    "tumor_contamination": null,
    "normal_contamination": null,
    "tso500_wetlab_pass": null,
    "tso500_seq_pass": null
  },
  "harmonized_input_file_status": {
    "snv_somatic": true,
    "snv_somatic_phased": false,
    "snv_germline": true,
    "cnv": false,
    "sv": false,
    "fusion": false,
    "splice": false,
    "tmb": false,
    "msi": false,
    "hrd_scarhrd": false,
    "hrd_tih": false,
    "hla": false,
    "chip": false
  },
  "harmonized_summary_stats": {
    "somatic_snv_num": 227,
    "somatic_indel_num": 51,
    "somatic_hotspot_num": 1,
    "somatic_variant_phased_num": null,
    "somatic_cnv_num": null,
    "somatic_cnv_del_num": null,
    "somatic_cnv_amp_num": null,
    "somatic_cnv_segment_num": null,
    "somatic_sv_fusion_num": null,
    "somatic_sv_fusion_actionable_num": null,
    "chip_variant_num": null,
    "germline_snv_num": 41891,
    "germline_indel_num": 7994,
    "germline_snv_hrr_num": null,
    "germline_indel_hrr_num": null,
    "germline_cnv_hrr_num": null,
    "tumor_purity": null,
    "tumor_ploidy": null,
    "scarhrd_score": null,
    "scarhrd_status": null,
    "tih_hrd_score": null,
    "tih_hrd_status": null,
    "tso500_gis": null,
    "tso500_hrd_status": null,
    "msi_status": null,
    "msi_score": null,
    "tmb_status": null,
    "tmb_score": null,
    "rna_fusion_total_num": null,
    "rna_fusion_filtered_num": null,
    "tso500_overlap_rna_fusion_total_num": null,
    "rna_fusion_actionable_num": null,
    "rna_fusion_filtered_and_actionable_num": null,
    "tso500_overlap_rna_fusion_filtered_num": null,
    "rna_exon_skipping_total_num": null,
    "rna_exon_skipping_actionable_num": null,
    "tso500_overlap_somatic_snv_num": 11,
    "tso500_overlap_somatic_indel_num": 1,
    "tso500_overlap_somatic_hotspot_num": 1,
    "tso500_overlap_somatic_variant_phased_num": null,
    "tso500_overlap_somatic_cnv_num": null,
    "tso500_overlap_somatic_cnv_del_num": null,
    "tso500_overlap_somatic_cnv_amp_num": null
  }
}