File Info
- Filename
- rna_s1221_S42.sample_scores.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/sm_testing/small_test_SMR_v3_cd574a28e_test/kallisto/rna_s1221_S42.sample_scores.tsv
- Size
- 2.1 KB
- Workflow Run
- small_test_SMR_v4_cd574a28e_test
- Published
- Feb 25, 2026 6:12 PM
Content
View in new tab| sample_id | category | signature | score_log2tpm1_mean | n_present | n_in_signature_targeted |
| rna_s1221_S42 | cancer | Angiogenesis_VEGF | 0.787 | 9 | 9 |
| rna_s1221_S42 | cancer | BMP_signaling | 2.246 | 13 | 13 |
| rna_s1221_S42 | cancer | Cell_cycle | 4.68 | 15 | 15 |
| rna_s1221_S42 | cancer | Hedgehog_signaling | 1.712 | 10 | 10 |
| rna_s1221_S42 | cancer | Hippo_signaling | 2.762 | 13 | 13 |
| rna_s1221_S42 | cancer | Homologous_recombination_repair | 5.011 | 33 | 33 |
| rna_s1221_S42 | cancer | Hormone_receptor_signaling | 1.503 | 8 | 8 |
| rna_s1221_S42 | cancer | JAK_STAT | 6.518 | 11 | 11 |
| rna_s1221_S42 | cancer | MSI_MMR | 5.666 | 23 | 23 |
| rna_s1221_S42 | cancer | MYC_signaling | 2.974 | 5 | 5 |
| rna_s1221_S42 | cancer | Metastasis_EMT | 2.67 | 39 | 39 |
| rna_s1221_S42 | cancer | NFkB_signaling | 5.075 | 10 | 10 |
| rna_s1221_S42 | cancer | NOTCH_signaling | 3.494 | 27 | 27 |
| rna_s1221_S42 | cancer | PI3K_AKT_mTOR | 5.66 | 18 | 18 |
| rna_s1221_S42 | cancer | RTK_MAPK_signaling | 3.337 | 32 | 32 |
| rna_s1221_S42 | cancer | TGFb_signaling | 3.198 | 13 | 13 |
| rna_s1221_S42 | cancer | WNT_signaling | 2.452 | 38 | 38 |
| rna_s1221_S42 | cancer | p53_pathway | 7.585 | 7 | 7 |
| rna_s1221_S42 | housekeeping | Housekeeping_core_minimal | 8.523 | 10 | 10 |
| rna_s1221_S42 | housekeeping | Housekeeping_normalization | 9.079 | 20 | 20 |
| rna_s1221_S42 | sex_chromosome | chry_signature | 6.535 | 5 | 5 |
| rna_s1221_S42 | tissue_origin | Bladder | 0.582 | 12 | 12 |
| rna_s1221_S42 | tissue_origin | Brain_Glioma | 0.545 | 9 | 9 |
| rna_s1221_S42 | tissue_origin | Breast | 1.121 | 13 | 13 |
| rna_s1221_S42 | tissue_origin | Breast_Basal_like_TNBC | 2.324 | 8 | 8 |
| rna_s1221_S42 | tissue_origin | Breast_HER2_enriched | 2.106 | 9 | 9 |
| rna_s1221_S42 | tissue_origin | Breast_Luminal_A | 1.362 | 10 | 10 |
| rna_s1221_S42 | tissue_origin | Breast_Luminal_B | 3.252 | 11 | 11 |
| rna_s1221_S42 | tissue_origin | Colorectal | 0.0 | 13 | 13 |
| rna_s1221_S42 | tissue_origin | Endometrial | 1.403 | 9 | 9 |
| rna_s1221_S42 | tissue_origin | Kidney_ClearCell | 3.133 | 8 | 8 |
| rna_s1221_S42 | tissue_origin | Liver | 0.0 | 10 | 10 |
| rna_s1221_S42 | tissue_origin | Lung_Adenocarcinoma | 1.474 | 9 | 9 |
| rna_s1221_S42 | tissue_origin | Lung_Squamous | 0.609 | 7 | 7 |
| rna_s1221_S42 | tissue_origin | Melanoma | 0.0 | 7 | 7 |
| rna_s1221_S42 | tissue_origin | Neuroendocrine | 1.107 | 8 | 8 |
| rna_s1221_S42 | tissue_origin | Ovary | 1.578 | 8 | 8 |
| rna_s1221_S42 | tissue_origin | Pancreas | 1.214 | 10 | 10 |
| rna_s1221_S42 | tissue_origin | Prostate | 0.0 | 7 | 7 |
| rna_s1221_S42 | tissue_origin | Upper_Urinary_Tract | 0.557 | 11 | 11 |
41 rows