Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-ea73a7e3-73a0-4923-9a07-fe0310630fc6/de/96e0fada77c523269f88b835610e59/NO_FILE
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/114db0d7825e71a42fdd3c583a8645/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/114db0d7825e71a42fdd3c583a8645/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-ea73a7e3-73a0-4923-9a07-fe0310630fc6/8c/27f3aae56c434fc919704e6d80e4ac/dev_rna_experiments_unified_table_2026-05-29.tsv
==> STAGING COMPLETE (4 inputs)

Wrote 1248 manifest rows to sample_manifest.tsv
Wrote 784 patient IDs to patient_id_list.txt