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Filename
qc_missing_or_unreadable.tsv
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s3://natera-platform-sandbox/platform-users/smedina/cgp_postprocess/testing_smr/altera_residuals_and_slides_v7/qc/qc_missing_or_unreadable.tsv
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Workflow Run
smedina-main-2026-06-06t06-08-00z
Published
Jun 06, 2026 12:07 AM

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patient_id reason sample_id sample_type sequencing_library_id specimen_id specimen_type summary_json
1173_CRX s3_path_qc_not_staged 1173_CRX_T1_RNA_SLD_01 tRNA 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1 1173_CRX clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_FWA s3_path_qc_not_staged 1173_FWA_T1_RNA_SLD_01 tRNA 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2 1173_FWA clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2/1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
1173_GZ1 s3_path_qc_not_staged 1173_GZ1_T1_RNA_SLD_01 tRNA 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 1173_GZ1 clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_JIG s3_path_qc_not_staged 1173_JIG_T1_RNA_SLD_01 tRNA 1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1 1173_JIG clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_K3O s3_path_qc_not_staged 1173_K3O_T1_RNA_SLD_01 tRNA 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1 1173_K3O clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1/1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_KRT s3_path_qc_not_staged 1173_KRT_T1_RNA_SLD_01 tRNA 1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1 1173_KRT clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1/1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_LAF s3_path_qc_not_staged 1173_LAF_T1_RNA_SLD_01 tRNA 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1 1173_LAF clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_OHF s3_path_qc_not_staged 1173_OHF_T1_RNA_SLD_01 tRNA 1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 1173_OHF clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1/1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_QEV s3_path_qc_not_staged 1173_QEV_T1_RNA_SLD_01 tRNA 1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1 1173_QEV clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1/1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_RDM s3_path_qc_not_staged 1173_RDM_T1_RNA_SLD_01 tRNA 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2 1173_RDM clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
1173_RGW s3_path_qc_not_staged 1173_RGW_T1_RNA_SLD_01 tRNA 1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1 1173_RGW clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1/1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
1173_SFA s3_path_qc_not_staged 1173_SFA_T1_RNA_SLD_01 tRNA 1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 1173_SFA clinical s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1/1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
NTC_0001_0001 s3_path_qc_not_staged NTC_0001_0001 NTC NTC_0001_0001_A23T55JLT4_1 NTC_0001 contrived s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/NTC_0001_0001_A23T55JLT4_1/NTC_0001_0001_A23T55JLT4_1.summary.json
14 rows