File Info

Filename
truth_matches.tsv
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/e2176da7002ffb9fc414d9f0ceedd2/truth_matches.tsv
Size
13.4 KB
Task
RECALL:DISCOVER_PRIMARY_TRUTH (truth-discovery-exact)
Attempt

Content

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sequencing_library_id patient_id sample_id specimen_id experiment truth_root truth_source truth_experiment harmonization_path truth_fusion_tsv truth_splice_tsv truth_summary_json library_id_used path_pattern match_score
659_bdp_T1_TRNA_1_B2372Y3LT4_1 659_bdp 659_bdp_T1_TRNA_1 659_bdp cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bdp/variants/rna_fusion/659_bdp.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bdp/variants/rna_splice/659_bdp.splice_events.altera_sendout_hg38.hmnz.tsv 659_bdp exact_primary 100
659_bld_T1_TRNA_1_B2372Y3LT4_1 659_bld 659_bld_T1_TRNA_1 659_bld cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bld/variants/rna_fusion/659_bld.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bld/variants/rna_splice/659_bld.splice_events.altera_sendout_hg38.hmnz.tsv 659_bld exact_primary 100
659_bqK_T1_TRNA_1_B2372Y3LT4_1 659_bqK 659_bqK_T1_TRNA_1 659_bqK cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bqK/variants/rna_fusion/659_bqK.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bqK/variants/rna_splice/659_bqK.splice_events.altera_sendout_hg38.hmnz.tsv 659_bqK exact_primary 100
659_bW9_T1_TRNA_1_B2372Y3LT4_1 659_bW9 659_bW9_T1_TRNA_1 659_bW9 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bW9/variants/rna_fusion/659_bW9.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_bW9/variants/rna_splice/659_bW9.splice_events.altera_sendout_hg38.hmnz.tsv 659_bW9 exact_primary 100
659_cX2_T1_TRNA_1_B2372Y3LT4_1 659_cX2 659_cX2_T1_TRNA_1 659_cX2 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_cX2/variants/rna_fusion/659_cX2.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_cX2/variants/rna_splice/659_cX2.splice_events.altera_sendout_hg38.hmnz.tsv 659_cX2 exact_primary 100
659_db9_T1_TRNA_1_B2372Y3LT4_1 659_db9 659_db9_T1_TRNA_1 659_db9 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_db9/variants/rna_fusion/659_db9.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_db9/variants/rna_splice/659_db9.splice_events.altera_sendout_hg38.hmnz.tsv 659_db9 exact_primary 100
659_dDe_T1_TRNA_1_B2372Y3LT4_1 659_dDe 659_dDe_T1_TRNA_1 659_dDe cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_dDe/variants/rna_fusion/659_dDe.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_dDe/variants/rna_splice/659_dDe.splice_events.altera_sendout_hg38.hmnz.tsv 659_dDe exact_primary 100
659_e1p_T1_TRNA_1_B2372Y3LT4_1 659_e1p 659_e1p_T1_TRNA_1 659_e1p cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_e1p/variants/rna_fusion/659_e1p.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_e1p/variants/rna_splice/659_e1p.splice_events.altera_sendout_hg38.hmnz.tsv 659_e1p exact_primary 100
659_epJ_T1_TRNA_1_B2372Y3LT4_1 659_epJ 659_epJ_T1_TRNA_1 659_epJ cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_epJ/variants/rna_fusion/659_epJ.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_epJ/variants/rna_splice/659_epJ.splice_events.altera_sendout_hg38.hmnz.tsv 659_epJ exact_primary 100
659_exc_T1_TRNA_1_B2372Y3LT4_1 659_exc 659_exc_T1_TRNA_1 659_exc cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_exc/variants/rna_fusion/659_exc.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_exc/variants/rna_splice/659_exc.splice_events.altera_sendout_hg38.hmnz.tsv 659_exc exact_primary 100
659_v2_T1_TRNA_1_B2372Y3LT4_1 659_v2 659_v2_T1_TRNA_1 659_v2 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_v2/variants/rna_fusion/659_v2.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_v2/variants/rna_splice/659_v2.splice_events.altera_sendout_hg38.hmnz.tsv 659_v2 exact_primary 100
659_w_T1_TRNA_1_B2372Y3LT4_1 659_w 659_w_T1_TRNA_1 659_w cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w/variants/rna_fusion/659_w.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w/variants/rna_splice/659_w.splice_events.altera_sendout_hg38.hmnz.tsv 659_w exact_primary 100
659_w0_T1_TRNA_1_B2372Y3LT4_1 659_w0 659_w0_T1_TRNA_1 659_w0 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w0/variants/rna_fusion/659_w0.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w0/variants/rna_splice/659_w0.splice_events.altera_sendout_hg38.hmnz.tsv 659_w0 exact_primary 100
659_w9_T1_TRNA_1_B2372Y3LT4_1 659_w9 659_w9_T1_TRNA_1 659_w9 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w9/variants/rna_fusion/659_w9.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_w9/variants/rna_splice/659_w9.splice_events.altera_sendout_hg38.hmnz.tsv 659_w9 exact_primary 100
659_x2_T1_TRNA_1_B2372Y3LT4_1 659_x2 659_x2_T1_TRNA_1 659_x2 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_x2/variants/rna_fusion/659_x2.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_x2/variants/rna_splice/659_x2.splice_events.altera_sendout_hg38.hmnz.tsv 659_x2 exact_primary 100
659_yF_T1_TRNA_1_B2372Y3LT4_1 659_yF 659_yF_T1_TRNA_1 659_yF cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_yF/variants/rna_fusion/659_yF.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_yF/variants/rna_splice/659_yF.splice_events.altera_sendout_hg38.hmnz.tsv 659_yF exact_primary 100
659_yV_T1_TRNA_1_B2372Y3LT4_1 659_yV 659_yV_T1_TRNA_1 659_yV cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_yV/variants/rna_fusion/659_yV.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_yV/variants/rna_splice/659_yV.splice_events.altera_sendout_hg38.hmnz.tsv 659_yV exact_primary 100
659_z2_T1_TRNA_1_B2372Y3LT4_1 659_z2 659_z2_T1_TRNA_1 659_z2 cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_z2/variants/rna_fusion/659_z2.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_z2/variants/rna_splice/659_z2.splice_events.altera_sendout_hg38.hmnz.tsv 659_z2 exact_primary 100
659_zC_T1_TRNA_1_B2372Y3LT4_1 659_zC 659_zC_T1_TRNA_1 659_zC cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ exact cgp_rna_exp0034 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/ s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_zC/variants/rna_fusion/659_zC.rnafusions.sendout_hg38.hmnz.tsv s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_exact/hmnz__cgp_rna_exp0034__2fc40342--20260601/659_zC/variants/rna_splice/659_zC.splice_events.altera_sendout_hg38.hmnz.tsv 659_zC exact_primary 100
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