File Info

Filename
feature_stats.csv
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/5b11715f761d1627fae83e19dedaa9/feature_stats.csv
Size
18.6 KB
Task
SOMATIC_CNV_REF_BUILDER:SOMA_CNV_BUILD_REFERENCE (build_reference)
Attempt

Content

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partial_range_gc_probe partial_range_median_insert_size partial_range_qcd partial_range_probe_coverage_median partial_range_dup_rate partial_var_gc_probe partial_var_median_insert_size partial_var_qcd partial_var_probe_coverage_median partial_var_dup_rate sample_id specimen_id flowcell sample_type r2
0.8362925978802641 7.291091422004423 1.6972112300382953 7.713984192180023 7.286986720566425 0.10694926532958395 0.12638646846755 0.002617863692735091 0.669893414884087 0.09415298762604384 1029_BNK6-N1-BDNA-1_A237CFYLT3_1 1029_BNK6 A237CFYLT3 normal 0.9057447289483747
0.994175232676371 6.03534222226056 1.3891783137223497 7.6161430549821985 5.245688842721817 0.13316193075469043 0.12424617882062847 0.001283966891265791 0.6665827990530291 0.07472512448038625 1136_2E7-N1-BDNA-1_A237CFYLT3_1 1136_2E7 A237CFYLT3 normal 0.8782779956441302
0.940775717447732 6.035593264504806 2.025043801128794 5.801258529146343 8.837233181078833 0.12402353362279074 0.10275548630245247 0.0045051658926473625 0.5573790704317848 0.21133674375032457 1136_0KC-N1-BDNA-1_A237CFYLT3_1 1136_0KC A237CFYLT3 normal 0.9328246472399604
0.8741872840764888 8.059491847803988 2.1896019391066197 7.322767804339968 6.619102414003008 0.11700456255182647 0.11782512291082226 0.005277012270470912 0.6392892386838854 0.12060406358299491 1029_FSS-N1-BDNA-1_A237CFYLT3_1 1029_FSS A237CFYLT3 normal 0.9156553187492044
0.9643798872273248 4.340580404216278 3.48019821267238 7.649022037331285 5.3782272911293365 0.1213232852984131 0.11318535615563688 0.025253194292616903 0.6267704748193372 0.11346768943399586 1136_03T-N1-BDNA-1_A237CFYLT3_1 1136_03T A237CFYLT3 normal 0.9119873010174492
0.8954705975393425 6.877253212638175 4.298780782061914 7.0839485974112915 9.571020550500544 0.10402104519196721 0.13104890334939842 0.000542552302016061 0.6174273092675077 0.1469601898891107 1136_0L8-N1-BDNA-1_A237CFYLT3_1 1136_0L8 A237CFYLT3 normal 0.9207714180181205
0.9004434890633497 3.6737052203859295 4.131848374688474 7.992445297950302 10.18083519395838 0.10789330500285976 0.10829922822046659 0.003782652764076348 0.6138285648264118 0.16619624918618542 1136_1I8-N1-BDNA-1_A237CFYLT3_1 1136_1I8 A237CFYLT3 normal 0.9062508463154048
0.8661904651069844 6.0252288835235825 5.280754757749131 6.8511985166538025 9.973873063369282 0.10222478520354819 0.12253025787565416 0.0004375105534816845 0.5832126771922024 0.1915947691751136 1029_XI2-N1-BDNA-1_A237CFYLT3_1 1029_XI2 A237CFYLT3 normal 0.9214775483727901
0.88240328716801 6.777076742877763 1.4303796798906083 6.926989822482978 10.388103466401777 0.11402405131144473 0.09757506377574691 0.0003452793647315066 0.597807580560462 0.19024802498761476 1029_PAP-N1-BDNA-1_A237CFYLT3_1 1029_PAP A237CFYLT3 normal 0.9243004188633387
0.8439694301341418 5.2155148527412045 1.2251321288131316 7.116526070796793 10.364107162682242 0.10192510562362156 0.13540754467685237 0.003623538039450097 0.612328843592211 0.14671496806786496 1029_BTXK-N1-BDNA-1_A237CFYLT3_1 1029_BTXK A237CFYLT3 normal 0.9154448402031984
0.9629197124254552 4.846614464919654 1.8426155956618095 6.983923797165863 7.1632040526659555 0.12189092065708128 0.11851480375504699 0.005698282543473392 0.6188918878338276 0.13500410521057077 1136_1VP-N1-BDNA-1_A237CFYLT3_1 1136_1VP A237CFYLT3 normal 0.9188387188815647
0.9194460055536958 5.636663206431347 3.6564254387775104 7.130974947451812 9.733271131175265 0.12009206946369257 0.12366414460871511 0.0023623889265983267 0.6507227547235198 0.10315864227747418 1136_0QH-N1-BDNA-1_A237CFYLT3_1 1136_0QH A237CFYLT3 normal 0.8979313210292575
0.9635403146347522 4.96307458767942 1.2625369111753522 6.956974356894582 8.269547786278341 0.12367183819508329 0.143664352429979 0.0019663789397498933 0.61503842966266 0.11565900077252775 1136_2F2-N1-BDNA-1_A237CFYLT3_1 1136_2F2 A237CFYLT3 normal 0.9274820955169267
0.912045454316843 5.4342147994762655 2.59240742791338 5.891842971739433 9.507402173838038 0.1172130200251002 0.10198097739619164 0.014115744713787825 0.5735921592105668 0.1930980986543535 1136_1VE-N1-BDNA-1_A237CFYLT3_1 1136_1VE A237CFYLT3 normal 0.9458428107933877
0.8974672675439608 5.062043746763349 2.9739669478852457 6.412825711731412 8.06743374017219 0.11760605143930364 0.10644294450928711 0.02141274367455558 0.6209034176500879 0.13363484272676582 1136_2PU-N1-BDNA-1_A237CFYLT3_1 1136_2PU A237CFYLT3 normal 0.9109881467947374
0.8957328388623037 5.297055940180494 1.222515866500435 6.973615233548472 7.77428234711118 0.11179624973603353 0.13544286447423176 0.003247715638056213 0.5594600983798593 0.19005307177181924 1029_YCN-N1-BDNA-1_A237CFYLT3_1 1029_YCN A237CFYLT3 normal 0.9449046146490676
0.9553793644500888 6.568534302492115 3.8908752118746865 7.779620348623984 5.628436849288084 0.12167178194106766 0.11338429388380263 0.02579056933538037 0.61345387099643 0.12569948384331936 1136_2RO-N1-BDNA-1_A237CFYLT3_1 1136_2RO A237CFYLT3 normal 0.9290624944046426
0.9856371382797533 7.36601864390129 1.2485096944668446 7.353273596510249 7.221769678031749 0.12916269401896105 0.12000407670026354 0.0038810886341672604 0.6151519644982011 0.13180017614840714 1136_2QY-N1-BDNA-1_A237CFYLT3_1 1136_2QY A237CFYLT3 normal 0.9135448237404569
0.9734936742559585 6.8795653064450155 2.25217427606723 7.409819035281643 8.130753528075337 0.1329237828312276 0.0954952773028747 0.0032316177984981543 0.6000631990599238 0.1682861230074758 1136_35B-N1-BDNA-1_A237CFYLT3_1 1136_35B A237CFYLT3 normal 0.9296583427221597
0.8932182482667271 4.851475088559388 1.9834628144039805 7.653470718897216 10.230806404861097 0.11094170949322477 0.11879154367174764 0.002091062268219193 0.584205645860591 0.18397003870621736 1136_2S9-N1-BDNA-1_A237CFYLT3_1 1136_2S9 A237CFYLT3 normal 0.9340182907264714
0.9690476722001642 5.455377946262164 2.7007694704595067 7.865528401365504 5.889833779991464 0.12840620726612786 0.11021830015895517 0.01293994034470528 0.6227650261850548 0.1256705260451569 1136_3FA-N1-BDNA-1_A237CFYLT3_1 1136_3FA A237CFYLT3 normal 0.9279521906203092
0.9586829099919018 4.772082475520754 3.272354395273162 7.896348132268589 6.216647878665723 0.12832116469300778 0.10434467020465804 0.017628997053117313 0.5965254592022424 0.15317970884697452 1136_5BE-N1-BDNA-1_A237CFYLT3_1 1136_5BE A237CFYLT3 normal 0.9358148938938988
0.9704092165042044 8.159411554730214 1.7367979865057976 6.5662040874137 13.770889508192532 0.12318340136520987 0.10703008954833071 0.0014801124779451223 0.5957075254588878 0.17259887114962644 1136_3X6-N1-BDNA-1_A237CFYLT3_1 1136_3X6 A237CFYLT3 normal 0.9317821810437421
0.8989793597956852 5.92567105258132 2.007295724508598 6.976236310084248 7.246847792114043 0.10684391988144892 0.12097323524640564 0.006470422011723344 0.585267110763308 0.18044531209711415 1136_3FE-N1-BDNA-1_A237CFYLT3_1 1136_3FE A237CFYLT3 normal 0.9277752725787026
0.9564115000234644 6.153622624951909 2.1856335588516393 7.251288074820543 8.128506170228484 0.12610097660677572 0.11312197211484785 0.0013791174066222556 0.6028556121073246 0.15654232176442953 1136_3I9-N1-BDNA-1_A237CFYLT3_1 1136_3I9 A237CFYLT3 normal 0.9323697650009731
0.8838088716114699 4.252770371564053 4.365321083114835 7.91711808959254 5.568120762372382 0.11947519525709159 0.10769826849402532 0.01808338422779046 0.617586952724598 0.13715619929649464 1136_3JH-N1-BDNA-1_A237CFYLT3_1 1136_3JH A237CFYLT3 normal 0.9300745148405822
0.8918635976714305 5.804205335800884 4.737052272219509 7.755009933885793 9.621027774590589 0.10725454058408092 0.10839646868752253 0.0028596786117213056 0.597648272348739 0.18384103976793625 1136_42D-N1-BDNA-1_A237CFYLT3_1 1136_42D A237CFYLT3 normal 0.9173248801162882
0.9167286384912565 4.516341283404147 2.5337923462498626 7.072698129129659 7.373100146077787 0.10988580846157836 0.15392454802444655 0.009144885546329293 0.5866634703221454 0.14038128764550045 1136_3T4-N1-BDNA-1_A237CFYLT3_1 1136_3T4 A237CFYLT3 normal 0.9187858577925931
0.9158879898015371 4.943193927915894 3.307298255550517 7.548556978599738 6.9668109462063885 0.12249040047118466 0.11545567645110141 0.017699496789278332 0.6206209684292766 0.12373345785915897 1136_5AH-N1-BDNA-1_A237CFYLT3_1 1136_5AH A237CFYLT3 normal 0.9318977248457682
0.9196695083757734 5.634601878495872 4.000322293117161 7.650624232077329 11.178594935886917 0.11400119008712423 0.1277228893447484 0.0007714085322562866 0.6309920600777568 0.12651245195811417 1136_4E9-N1-BDNA-1_A237CFYLT3_1 1136_4E9 A237CFYLT3 normal 0.918012566797879
0.914752718773977 5.262181266646802 2.0414662779197132 7.570109492841615 7.819565572487558 0.11171680325677386 0.11182811329754799 0.00574700716257277 0.6346828777762209 0.13602519850688452 1136_4DP-N1-BDNA-1_A237CFYLT3_1 1136_4DP A237CFYLT3 normal 0.9161000058604526
0.8886215114330203 6.526246782044918 1.1845054290725447 7.390798074632169 9.063945843478058 0.11586703195370229 0.10772790051060935 0.0015643999415354507 0.6049127420138969 0.169927925580256 1136_42G-N1-BDNA-1_A237CFYLT3_1 1136_42G A237CFYLT3 normal 0.9343786247244785
0.9889432545904258 6.350620905196553 1.6234617410956353 7.585190949908147 12.828131974184501 0.12927047445651516 0.12169862749913347 0.0011728612929939929 0.6090866135099912 0.13877142324136627 1136_5JZ-N1-BDNA-1_A237CFYLT3_1 1136_5JZ A237CFYLT3 normal 0.9206273758615733
0.8821145882984598 9.03128350048356 2.907029589005492 7.411130759269058 9.879278508251616 0.11346522542241712 0.11340314032908141 0.0001248032760575478 0.6061311825156771 0.16687564845676672 1136_5Z2-N1-BDNA-1_A237CFYLT3_1 1136_5Z2 A237CFYLT3 normal 0.9267686044273613
0.8377955227511606 7.726786293943475 2.3615128628416553 5.781448499317309 10.542682402012389 0.0999663237439419 0.11636386805405413 0.005219369962369503 0.6028329990514288 0.1756174391882057 1136_5PQ-N1-BDNA-1_A237CFYLT3_1 1136_5PQ A237CFYLT3 normal 0.9304335850193398
0.897928466718559 4.960570682024597 2.518910759925561 6.368544464884806 6.9744610808560985 0.12045557070094459 0.10703168985987532 0.012273770340124796 0.6262584778902628 0.13398049120879252 1136_6F7-N1-BDNA-1_A237CFYLT3_1 1136_6F7 A237CFYLT3 normal 0.9292680841569178
0.9206976325605288 7.600949169201341 2.2398057118359644 6.54867608353032 7.623897353230877 0.12298541620116654 0.12057300048392496 0.0032427491226720414 0.6057398593273036 0.14745897486493278 1136_65R-N1-BDNA-1_A237CFYLT3_1 1136_65R A237CFYLT3 normal 0.9312286288936212
0.9044102943000336 8.401309338449478 4.28411500064731 7.409704059904772 9.551670617339198 0.11317992912271412 0.11590064839086132 0.0018740838168563062 0.6280003030983027 0.14104503557126555 1136_6K6-N1-BDNA-1_A237CFYLT3_1 1136_6K6 A237CFYLT3 normal 0.910943205019916
0.9235381262160052 5.64755421983483 2.1290652594891566 7.433810034406774 8.556837840740494 0.11167383898917577 0.11686891361076393 0.009457662033926452 0.5999634347035396 0.16203615066259416 1136_6WU-N1-BDNA-1_A237CFYLT3_1 1136_6WU A237CFYLT3 normal 0.923649256449599
0.9176265444465553 4.763977037792278 2.3646818101788902 6.964620485521564 7.919392342874861 0.11513289107440948 0.11949129274191356 0.006253515237533365 0.5585815244671144 0.2005407764790293 1136_75V-N1-BDNA-1_A237CFYLT3_1 1136_75V A237CFYLT3 normal 0.9348971531785502
0.9000912112085775 6.000734229078299 2.602193568548296 6.9216968698270716 7.173154322002705 0.1223004568140656 0.13095917529901252 0.004820680874752513 0.6295358389005654 0.11238384811160397 1136_7VJ-N1-BDNA-1_A237CFYLT3_1 1136_7VJ A237CFYLT3 normal 0.9300969870439285
0.9507711095929873 4.600477348409237 0.6443703251080195 7.096932215466222 11.672778134208919 0.12185164587317736 0.13720825873739206 0.00203734046662229 0.6139308379205985 0.12497191700220976 1136_77Q-N1-BDNA-1_A237CFYLT3_1 1136_77Q A237CFYLT3 normal 0.9161498629130949
0.9178373369833333 4.95576820244833 3.00243579384282 7.639222247734381 6.680373297041639 0.11450690671639917 0.11007721956684947 0.019525565616758948 0.59216163837298 0.16372866972701242 1136_7BW-N1-BDNA-1_A237CFYLT3_1 1136_7BW A237CFYLT3 normal 0.9359183120282728
0.9184533001184307 7.114510800136978 4.598389640045971 7.557945637195001 7.958781878977858 0.11731863708505229 0.10885998132227008 0.0005826337635972 0.6192170287398167 0.15402171908926368 1136_7OO-N1-BDNA-1_A237CFYLT3_1 1136_7OO A237CFYLT3 normal 0.9217571964941683
0.9637768005676418 7.722084669675256 3.4280996041748235 7.19063404692192 9.944094783636704 0.1339974427429011 0.10696894983354702 0.00013220059450512274 0.6067616829786419 0.15213972385040486 1136_7L-N1-BDNA-1_A237CFYLT3_1 1136_7L A237CFYLT3 normal 0.9248094254703905
0.9210748351999631 7.1920038959341035 4.117246913520452 7.447086475994519 10.146695089236282 0.1118673433123321 0.10692353952484362 0.0006210223436872226 0.5705120585374914 0.21007603628164553 1136_814-N1-BDNA-1_A237CFYLT3_1 1136_814 A237CFYLT3 normal 0.9334135787222841
0.9482985407950055 5.309895165586807 1.6589059593320181 7.179648912763921 8.281932820443693 0.12196775075122299 0.11918174821050316 0.0036719674593133564 0.6096720407790744 0.14550649279988592 869_D36-N1-BDNA-1_A237CFYLT3_1 869_D36 A237CFYLT3 normal 0.9251860764396564
0.9584564432417801 5.9007788618880195 1.4437640351483008 7.151471324705482 8.155341980117964 0.13179974286151058 0.10369198433779488 0.0012020596004880242 0.6321153550786874 0.13119085812151898 869_DNH-N1-BDNA-1_A237CFYLT3_1 869_DNH A237CFYLT3 normal 0.9156578170933625
0.9709710348475884 5.516406795946628 2.4310700480471628 7.273788279223226 8.536959153767652 0.13173277395089178 0.14046441561865183 0.0006343925856666365 0.6105916647868029 0.11657675305798684 869_CPH-N1-BDNA-1_A237CFYLT3_1 869_CPH A237CFYLT3 normal 0.9283512014961379
0.9397809170383613 6.460886544226815 2.4487271818076928 7.159594766882884 7.654285766788658 0.11694756796085387 0.12111450341377923 0.0011241518168961682 0.6282558845302981 0.13255789227817266 869_DOI-N1-BDNA-1_A237CFYLT3_1 869_DOI A237CFYLT3 normal 0.915252178023876
1.015381344731767 5.58351031180792 1.7415450104094412 7.039201773179566 9.541993469441547 0.1290214489901438 0.10414885539250598 0.0051791394835275515 0.6006321977705685 0.16101835836325407 869_ED4-N1-BDNA-1_A237CFYLT3_1 869_ED4 A237CFYLT3 normal 0.9003376626933336
0.8607367210927407 6.111001231500103 0.6882842712412396 6.934003412684926 10.790048398058149 0.10407229996966913 0.11043407320326416 3.0047192478529875e-05 0.6043957674579267 0.18106781217666157 869_FH7-N1-BDNA-1_A237CFYLT3_1 869_FH7 A237CFYLT3 normal 0.9122754604323249
0.9686406854484698 5.211663111584057 2.820103650031304 7.236795135832256 5.868088458876922 0.13740192309489152 0.10744264248975216 0.01572281685818428 0.6451977685692043 0.09423484898796768 869_HI8-N1-BDNA-1_A237CFYLT3_1 869_HI8 A237CFYLT3 normal 0.8962913505279669
0.9404269378769694 9.806450276702721 4.5017944497744224 7.578134726582535 8.778100080498259 0.1160243697925603 0.12279997674667048 0.0004012464737554961 0.6007874526438658 0.15998695434314794 869_HV2-N1-BDNA-1_A237CFYLT3_1 869_HV2 A237CFYLT3 normal 0.9240103354456611
0.9317883474145405 5.424932555523938 1.0434460068086557 6.971832630312952 11.50745856276749 0.12397552647574542 0.11128117888864512 0.0010580354481735475 0.624719850197088 0.13896540899034796 869_I3-N1-BDNA-1_A237CFYLT3_1 869_I3 A237CFYLT3 normal 0.9236394517039181
0.8981347199490161 6.107778135611801 2.511964818567331 7.060448973858627 6.968692530605466 0.1245445034978086 0.1080733447079857 0.011778929088406442 0.6028278451648099 0.15277537754098935 869_RWW-N1-BDNA-1_A237CFYLT3_1 869_RWW A237CFYLT3 normal 0.9336323519050328
0.9934594631954736 4.98320862107947 1.3972312484150367 6.554175803155825 8.836954541545818 0.13166233747619718 0.1133234410567565 0.0027078691756628995 0.6195557971484956 0.13275055514288794 869_KAF-N1-BDNA-1_A237CFYLT3_1 869_KAF A237CFYLT3 normal 0.9154318025632568
0.9568273207226909 8.434088356119037 1.3841129974310187 6.82466623841599 8.683931477059339 0.12802864390681756 0.11442208740101152 0.002472049564061602 0.5853709087873308 0.16970631034077857 869_OFT-N1-BDNA-1_A237CFYLT3_1 869_OFT A237CFYLT3 normal 0.9291446042582376
0.9490829684281769 5.191738858086138 2.210799443001317 7.669011936557359 7.837670299430114 0.12209285926628848 0.11616667016338861 0.00948992542050036 0.6300830267746373 0.1221675183751851 869_K8V-N1-BDNA-1_A237CFYLT3_1 869_K8V A237CFYLT3 normal 0.9140693510822733
0.9055081784424981 5.762245706838975 2.817550349773473 7.183618275405401 5.508996972722825 0.12041331830009731 0.13551287504825454 0.01214264963840912 0.6355281515622933 0.09640300545094578 869_P6B-N1-BDNA-1_A237CFYLT3_1 869_P6B A237CFYLT3 normal 0.914597899554463
0.9661715718695694 5.317958619457963 2.493173446420915 7.784149606549081 7.979808630770896 0.12487182680320427 0.13157093574217057 0.0028124768642448987 0.6200682508718867 0.12067650971849353 869_ROX-N1-BDNA-1_A237CFYLT3_1 869_ROX A237CFYLT3 normal 0.9167912817239845
0.9584023153871628 6.0799929767539425 2.4069635511983183 7.454218315910018 11.683828271137315 0.1236304394706209 0.11179836335967351 0.0033147191993181694 0.5840327666537437 0.17722371131664383 869_LSE-N1-BDNA-1_A237CFYLT3_1 869_LSE A237CFYLT3 normal 0.9313211621643457
0.9273284911005424 5.791688750529072 2.755374761367543 6.497644486930958 6.540102636336765 0.1233498699104966 0.11608928629230342 0.012476065434568678 0.6005504140928833 0.14753436426974795 869_UZP-N1-BDNA-1_A237CFYLT3_1 869_UZP A237CFYLT3 normal 0.9324952969824776
0.9479202245829909 5.473561357761426 2.145952821245645 7.5189008686816 8.11269653318207 0.12367158619985702 0.14257783163589674 0.0026311715421815612 0.6219036043544324 0.10921580626763232 869_TB0-N1-BDNA-1_A237CFYLT3_1 869_TB0 A237CFYLT3 normal 0.9201975920329695
0.9451441229112433 5.85842516356305 1.2694100433580724 7.321699813073079 7.856890312123955 0.12184821574964448 0.12575892925444254 0.0037302094865819895 0.6410132584693439 0.10764938703998708 869_VTY-N1-BDNA-1_A237CFYLT3_1 869_VTY A237CFYLT3 normal 0.902163386211124
0.9697058912605975 9.013191662307115 1.0784260169279358 7.676492711268662 9.386250526656642 0.1223842017455995 0.1187914397355625 0.00027785552666655236 0.5900233170869692 0.16852318590520218 869_NTY-N1-BDNA-1_A237CFYLT3_1 869_NTY A237CFYLT3 normal 0.928026366094229
0.9046646729161751 5.542090759547094 4.039469198727207 7.491719780016241 5.226927441356743 0.11423728607698568 0.1218088168138933 0.030670549745342248 0.6213206809647854 0.11196266639899333 869_OMQ-N1-BDNA-1_A237CFYLT3_1 869_OMQ A237CFYLT3 normal 0.9237034840249578
0.9146694433225739 5.831679989326627 0.9243603697078306 6.240867632532904 7.694351637264207 0.12060927647469558 0.11520373729209425 0.0014306221245114722 0.6202635468540456 0.14249281725465301 869_VV1-N1-BDNA-1_A237CFYLT3_1 869_VV1 A237CFYLT3 normal 0.9153574841704234
0.9437163692038176 5.789125080285556 2.0762104923774984 6.854256780277584 10.758420873973524 0.11765759818550621 0.1132703090712871 0.0010101094022256611 0.6016732994173998 0.16638868392358128 869_YP6-N1-BDNA-1_A237CFYLT3_1 869_YP6 A237CFYLT3 normal 0.9062524871405364
0.9607726444008248 4.065987226695672 2.476173626179137 7.437222847467796 6.311859448834454 0.12156415834368182 0.13762104157275665 0.013445743396200057 0.5898898615763986 0.13747919511096285 869_XYF-N1-BDNA-1_A237CFYLT3_1 869_XYF A237CFYLT3 normal 0.9364624015792965
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