Count mode: frac
Count mode: frac
Count mode: frac
Count mode: frac
[W::hts_idx_load3] The index file is older than the data file: 1029_PFK-N1-BDNA-1_A23MHW3LT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_PFK-N1-BDNA-1_A23MHW3LT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_PFK-N1-BDNA-1_A23MHW3LT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_PFK-N1-BDNA-1_A23MHW3LT4_1.recalibrated.bam.bai
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Reads: 112777507 total, 81175 skipped (flags/unmapped)
Fragments: 56734596 total (55901747 tlen-paired, 4731 hash-paired, 658 singletons, 21012 discordant, 806448 orphans, 17123 too large [>5000 bp], 23177871 duplicates)
Reads: 119899242 total, 69029 skipped (flags/unmapped)
Fragments: 60323366 total (59459874 tlen-paired, 3231 hash-paired, 698 singletons, 14070 discordant, 845493 orphans, 14836 too large [>5000 bp], 24076238 duplicates)
Reads: 131151939 total, 76151 skipped (flags/unmapped)
Fragments: 65981593 total (65021867 tlen-paired, 5785 hash-paired, 541 singletons, 21317 discordant, 932083 orphans, 22613 too large [>5000 bp], 27011639 duplicates)
Reads: 133743740 total, 123025 skipped (flags/unmapped)
Fragments: 67713313 total (64884850 tlen-paired, 2234 hash-paired, 654 singletons, 560026 discordant, 2265549 orphans, 230146 too large [>5000 bp], 27559915 duplicates)