Count mode: frac
Count mode: frac
Count mode: frac
Count mode: frac
[W::hts_idx_load3] The index file is older than the data file: 1029_7OE-N1-BDNA-1_B23H2GYLT3_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_7OE-N1-BDNA-1_B23H2GYLT3_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_7OE-N1-BDNA-1_B23H2GYLT3_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_7OE-N1-BDNA-1_B23H2GYLT3_1.recalibrated.bam.bai
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Reads: 97448162 total, 86556 skipped (flags/unmapped)
Fragments: 48912282 total (48398253 tlen-paired, 15857 hash-paired, 7691 singletons, 10834 discordant, 479647 orphans, 12190 too large [>5000 bp], 11410052 duplicates)
Reads: 107437113 total, 77305 skipped (flags/unmapped)
Fragments: 53944640 total (53347446 tlen-paired, 17018 hash-paired, 8598 singletons, 10894 discordant, 560684 orphans, 19905 too large [>5000 bp], 12502133 duplicates)
Reads: 106510079 total, 75055 skipped (flags/unmapped)
Fragments: 53483734 total (52906087 tlen-paired, 16740 hash-paired, 8363 singletons, 7935 discordant, 544609 orphans, 10264 too large [>5000 bp], 12469999 duplicates)
Reads: 110082207 total, 136220 skipped (flags/unmapped)
Fragments: 55541187 total (53778655 tlen-paired, 19282 hash-paired, 8614 singletons, 340333 discordant, 1394303 orphans, 133265 too large [>5000 bp], 12765448 duplicates)