Count mode: frac
Count mode: frac
Count mode: frac
Count mode: frac
[W::hts_idx_load3] [W::hts_idx_load3] The index file is older than the data file: 1029_BSVB-N1-BDNA-1_B23L5TMLT4_1.recalibrated.bam.bai
The index file is older than the data file: 1029_BSVB-N1-BDNA-1_B23L5TMLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_BSVB-N1-BDNA-1_B23L5TMLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 1029_BSVB-N1-BDNA-1_B23L5TMLT4_1.recalibrated.bam.bai
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Deduplicated 94 probes with identical coordinates
Loaded 472416 probes across 3366 contigs
Reads: 31247126 total, 39904 skipped (flags/unmapped)
Fragments: 16034937 total (15155934 tlen-paired, 2936 hash-paired, 259 singletons, 2717 discordant, 873091 orphans, 5349 too large [>5000 bp], 6674690 duplicates)
Reads: 32721291 total, 35959 skipped (flags/unmapped)
Fragments: 16794407 total (15877565 tlen-paired, 2481 hash-paired, 302 singletons, 2073 discordant, 911986 orphans, 4403 too large [>5000 bp], 6864293 duplicates)
Reads: 36275639 total, 38183 skipped (flags/unmapped)
Fragments: 18620142 total (17586587 tlen-paired, 4320 hash-paired, 211 singletons, 2959 discordant, 1026065 orphans, 11724 too large [>5000 bp], 7760996 duplicates)
Reads: 39934454 total, 80656 skipped (flags/unmapped)
Fragments: 21014383 total (17543352 tlen-paired, 3098 hash-paired, 313 singletons, 703855 discordant, 2763765 orphans, 294555 too large [>5000 bp], 8151890 duplicates)