sample cval dipLogR_flag n_alternative_dipLogR wgd fga n_dip_bal_segs frac_dip_bal_segs n_dip_imbal_segs frac_dip_imbal_segs n_amps n_homdels frac_homdels n_homdels_clonal frac_homdels_clonal n_cn_states n_segs n_cnlr_clusters n_lcn_na n_loh frac_loh n_segs_subclonal frac_segs_subclonal n_segs_below_dipLogR frac_below_dipLogR n_segs_balanced_odd_tcn frac_balanced_odd_tcn n_segs_imbalanced_diploid_cn frac_imbalanced_diploid_cn n_segs_lcn_greater_mcn frac_lcn_greater_mcn n_snps n_het_snps frac_het_snps n_snps_with_300x_in_tumor n_het_snps_with_300x_in_tumor n_het_snps_hom_in_tumor_1pct n_het_snps_hom_in_tumor_5pct frac_het_snps_hom_in_tumor_1pct frac_het_snps_hom_in_tumor_5pct mean_cnlr_residual sd_cnlr_residual n_segs_discordant_tcn frac_discordant_tcn n_segs_discordant_lcn frac_discordant_lcn n_segs_discordant_both frac_discordant_both n_segs_icn_cnlor_discordant frac_icn_cnlor_discordant mafr_median_all mafr_median_clonal mafr_n_gt_1
HCC1395_tumor_vs_HCC1395_BL 200 FALSE 0 TRUE 0.8 1 0.086 0 0 2 0 0 0 0 7 8 8 3 0 0 0 0 1 0.088 0 0 0 0 2 0.7 2512 219 0.087 1059 117 5 5 0.023 0.023 -0.021 0.63 1 0.089 3146635 0.089 1 0.089 2 0.68 0.038 0.036 1
HCC1395_tumor_vs_HCC1395_BL 50 FALSE 0 TRUE 0.8 1 0.086 0 0 2 1 0.039 0 0 8 9 9 3 1 0.039 1 0.039 1 0.039 0 0 0 0 2 0.7 2512 219 0.087 1059 117 5 5 0.023 0.023 -0.017 0.61 0 0 0 0 0 0 2 0.68 0.036 0.036 2