Clear
Retried
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_Blood) 15s 2s 3s 10s 9.2 MB 139% 199.3 MB 128.0 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_Blood) 9s 6s - - 3.3 MB 122% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 21s 7s 4s 9s 483.4 MB 294% 157.9 MB 1.5 MB 0 bytes 1.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood) 34s 8s 17s 8s 489.6 MB 174% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 47s 7s 30s 10s 2.8 GB 107% 213.3 MB 7.4 MB 199.1 MB 7.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood) 7s 3s 3s 1s 296.7 MB 355% 96.1 MB 737.2 KB 0 bytes 744.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 16s 1s 4s 10s 920.8 MB 5593% 12.8 MB 393.0 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 34s 2s 5s 26s 485.1 MB 874% 780.1 MB 430.4 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (Sig_18_Blood) 4s 3s 0s 0s 31.5 MB 4057% 269.6 KB 1.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (Sig_18_Blood) 9s 6s 0s 2s 21.1 MB 4131% 8.5 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 5s 3s - - 21.3 MB 6228% 647.8 KB 524.9 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood) 6s 4s 0s 1s 3.5 MB 8052% 1.2 MB 811.6 KB 0 bytes 96.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 20s 4s 7s 8s 34.1 MB 291% 3.0 GB 212.6 KB 0 bytes 224.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (Sig_18_Blood) 21s 4s 7s 9s 36.6 MB 289% 3.0 GB 197.1 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood) 5s 1s 1s 2s 383.5 MB 1139% 16.7 MB 57.5 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (Sig_18_Blood) 6s 4s 0s 1s 16.5 MB 4419% 31.3 MB 340.0 KB 0 bytes 348.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (Sig_18_Blood) 8s 1s 3s 3s 1.3 GB 963% 81.5 MB 58.4 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:GT_CORRECTION (Sig_18_Blood) 8s 2s 3s 2s 1.6 GB 956% 68.9 MB 42.8 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (Sig_18_Blood) 19s 3s 7s 8s 34.0 MB 289% 3.0 GB 200.9 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (Sig_18_Blood) 3s 2s - - 21.4 MB 6596% 487.4 KB 364.1 KB 0 bytes 376.0 KB 1
27 items found |
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