|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
5s |
4s |
0s |
0s |
5.3 MB |
2853% |
222.1 KB |
699 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
10s |
8s |
0s |
1s |
5.5 MB |
2550% |
222.0 KB |
698 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal)
|
3s |
2s |
- |
- |
23.0 MB |
6182% |
218.0 KB |
21.4 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
6s |
- |
- |
23.4 MB |
6732% |
201.3 KB |
21.3 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal)
|
17s |
5s |
8s |
3s |
3.9 GB |
1302% |
395.7 MB |
19.7 MB |
0 bytes |
19.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL)
|
16s |
5s |
7s |
3s |
342.1 MB |
1380% |
302.6 MB |
8.8 MB |
0 bytes |
8.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal)
|
10s |
6s |
- |
- |
12.5 MB |
110% |
5.9 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL)
|
9s |
6s |
- |
- |
12.1 MB |
102% |
4.7 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal)
|
22s |
5s |
15s |
1s |
743.6 MB |
273% |
89.3 MB |
34.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL)
|
16s |
2s |
12s |
1s |
1005.9 MB |
303% |
89.3 MB |
34.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal)
|
9s |
5s |
2s |
1s |
340.0 MB |
809% |
41.8 MB |
4.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
2s |
2s |
1s |
221.4 MB |
985% |
41.8 MB |
5.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
1m 6s |
5s |
58s |
2s |
2.9 GB |
338% |
695.8 MB |
853.9 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
54s |
1s |
47s |
5s |
2.9 GB |
392% |
694.8 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal)
|
8s |
3s |
2s |
2s |
443.5 MB |
993% |
80.4 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL)
|
9s |
3s |
2s |
3s |
444.9 MB |
1001% |
80.3 MB |
1011.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal)
|
4s |
2s |
- |
- |
21.1 MB |
7951% |
264.2 KB |
46.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL)
|
4s |
2s |
- |
- |
21.4 MB |
7768% |
250.7 KB |
40.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal)
|
3s |
1s |
- |
- |
3.2 MB |
6900% |
282.1 KB |
48.6 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
1s |
- |
- |
3.1 MB |
6995% |
263.3 KB |
41.9 KB |
0 bytes |
52.0 KB |
1 |