succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal) 5s 4s 0s 0s 5.3 MB 2853% 222.1 KB 699 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL) 10s 8s 0s 1s 5.5 MB 2550% 222.0 KB 698 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal) 3s 2s - - 23.0 MB 6182% 218.0 KB 21.4 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL) 8s 6s - - 23.4 MB 6732% 201.3 KB 21.3 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal) 17s 5s 8s 3s 3.9 GB 1302% 395.7 MB 19.7 MB 0 bytes 19.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL) 16s 5s 7s 3s 342.1 MB 1380% 302.6 MB 8.8 MB 0 bytes 8.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal) 10s 6s - - 12.5 MB 110% 5.9 MB 1.8 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL) 9s 6s - - 12.1 MB 102% 4.7 MB 1.8 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal) 22s 5s 15s 1s 743.6 MB 273% 89.3 MB 34.7 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL) 16s 2s 12s 1s 1005.9 MB 303% 89.3 MB 34.7 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal) 9s 5s 2s 1s 340.0 MB 809% 41.8 MB 4.9 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL) 6s 2s 2s 1s 221.4 MB 985% 41.8 MB 5.1 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal) 1m 6s 5s 58s 2s 2.9 GB 338% 695.8 MB 853.9 MB 0 bytes 856.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL) 54s 1s 47s 5s 2.9 GB 392% 694.8 MB 848.9 MB 0 bytes 851.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal) 8s 3s 2s 2s 443.5 MB 993% 80.4 MB 1.0 MB 0 bytes 1.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL) 9s 3s 2s 3s 444.9 MB 1001% 80.3 MB 1011.6 KB 0 bytes 1.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal) 4s 2s - - 21.1 MB 7951% 264.2 KB 46.5 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL) 4s 2s - - 21.4 MB 7768% 250.7 KB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 3s 1s - - 3.2 MB 6900% 282.1 KB 48.6 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 3s 1s - - 3.1 MB 6995% 263.3 KB 41.9 KB 0 bytes 52.0 KB 1
304 items found |