Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/90a0e23d38845f510af75dbcad71a5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/bf2bc736140854a9bae2c88ec32be6/custom_Sig_18_tumor_normal.tnseq.filtered_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/90a0e23d38845f510af75dbcad71a5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory