[INFO] Reading target VCF: Sig_18_Blood.chip.harmonized.vcf.gz [INFO] Reading source VCF: Sig_18_Blood.germline.harmonized.vcf.gz [INFO] Adding header fields with prefix 'GERMLINE' for: GT, AD, DP, GQ, QD [INFO] Building source variant lookup... [INFO] Found 395 variants in source VCF [INFO] Processing target variants and merging characteristics... [INFO] Complete! Processed 321 variants, matched 34 (10.6%) [SUCCESS] VCF merging completed successfully!