seg_id	specimen_id	chrom	start	end	tumor_sample_id	normal_sample_id	n_probes	n_het_sites	cnlr_median	cnlr_wmean	mean_mbaf	median_het_depth	mean_valor	mafR	tcn	lcn	call	clone_subset	clone_purity	purity	clonal_frac	n_clones	dipLogR	z_score	residual_lr	residual_lor	sample_type
1	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	451414	3511745	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1260	256	0.4349	0.4295	0.8535	624.8	1.8325	3.9528	3	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	68.08	0.047	-0.0328	somatic
2	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	3512005	75541524	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	15825	2022	0.6906	0.6937	0.8811	712.0	2.0086	4.2601	4	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	283.06	0.0101	0.0172	somatic
3	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	75615822	144914786	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6497	683	1.0936	1.1109	0.6418	669.8	0.5893	0.36	6	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	224.54	-0.0136	0.0032	somatic
4	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	144955409	209851442	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	13934	1713	0.7056	0.703	0.5333	711.5	0.1585	0.0285	4	2	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	210.56	-0.0073	0.1035	somatic
5	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	209938187	218441380	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	923	86	0.0044	-0.0196	0.8183	218.5	1.5039	2.3526	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	27.12	0.0044	0.0109	somatic
6	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	219173875	233905799	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2775	409	0.64	0.6335	0.5266	498.0	0.1731	0.0359	4	2	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	85.21	0.0031	0.0707	somatic
7	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	234214474	240930802	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1048	267	-0.0022	-0.0001	0.831	272.0	1.5543	2.4901	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	50.86	-0.0022	0.0311	somatic
8	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr1	240936590	248918363	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1276	207	0.6694	0.6594	0.5626	954.2	0.1278	0.0198	5	2	amp	1;3	0.3921	0.6647	0.5899	5	-0.43	60.75	0.002	-0.0223	somatic
9	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr10	47057	3785038	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	306	57	0.8865	0.8773	0.5461	661.0	0.2393	0.0539	5	2	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	39.24	0.0127	-0.1513	somatic
10	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr10	4826273	107164585	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	13294	1681	0.0101	0.0109	0.8084	349.0	1.4226	2.2075	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	115.47	0.0101	0.002	somatic
11	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr10	109865126	133626762	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3686	587	0.6897	0.7043	0.5373	625.0	0.1556	0.0272	4	2	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	105.92	-0.0035	0.1176	somatic
12	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	193697	2899524	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1456	394	-0.2926	-0.2872	0.7899	446.5	1.2926	2.137	2	0	cn-loh	1;2;4	0.5771	0.6647	0.8683	5	-0.43	58.69	-0.2926	-0.0297	somatic
13	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	2899580	50033670	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6606	1046	0.0202	0.0151	0.827	409.0	1.5457	2.4324	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	99.5	0.0202	0.0118	somatic
14	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	54603186	58838415	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	843	232	0.7018	0.6977	0.5633	1374.0	0.1622	0.0339	5	2	amp	1;4	0.4143	0.6647	0.6233	5	-0.43	51.96	0.0045	-0.0239	somatic
15	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	58839519	62708409	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1465	129	-0.0443	-0.0272	0.8361	419.8	1.651	2.7633	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	36.66	-0.0443	-0.0118	somatic
16	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	62708677	110712238	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	8985	980	0.5739	0.5472	0.5483	583.5	0.2647	0.106	5	2	amp	2;3;4;5	0.2982	0.6647	0.4486	5	-0.43	137.78	0.0406	-0.046	somatic
17	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	111281354	118663454	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1703	146	0.0405	0.0567	0.8284	350.5	1.5592	2.4681	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	37.54	0.0405	0.0185	somatic
18	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	118679522	120485191	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	700	104	0.6042	0.5688	0.5233	1046.0	0.1182	0.0118	4	2	amp	1;2	0.5293	0.6647	0.7964	5	-0.43	40.4	-0.0087	0.0686	somatic
19	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr11	120660301	134387716	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1984	291	0.0143	0.0253	0.8272	466.2	1.5843	2.5569	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	52.59	0.0143	0.0157	somatic
20	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	66830	175033	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	30	3	-1.5358	-1.3654	0.557	35.0	0.4249	0.1268	0	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	21.25	0.0407	0.0941	somatic
21	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	191032	8477484	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2392	297	0.0381	0.037	0.8102	466.0	1.4732	2.1981	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	49.35	0.0381	0.0194	somatic
22	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	8513651	34026722	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4539	669	0.6204	0.6277	0.5256	593.2	0.1018	0.0146	6	3	amp	2;4;5	0.2726	0.6647	0.4101	5	-0.43	105.64	-0.0073	0.0697	somatic
23	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	38316861	47078380	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1416	159	-0.1887	-0.149	0.8186	219.5	1.4812	2.2438	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	41.05	-0.1887	0.0131	somatic
24	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	47078356	49021704	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	719	173	0.6977	0.6858	0.5242	809.0	0.1267	0.0141	4	2	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	47.29	0.0045	0.0688	somatic
25	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	49021704	49055079	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	608	4	0.0621	0.143	0.5064	10665.5	0.0642	0.0021	5	2	amp	3	0.0256	0.6647	0.0385	5	-0.43	3.87	0.0077	-0.0068	somatic
26	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	49055218	51104238	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	888	27	0.7206	0.7227	0.5664	693.5	0.1079	0.0136	5	2	amp	1;5	0.4285	0.6647	0.6446	5	-0.43	54.3	0.0045	-0.0254	somatic
27	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	51106475	80219964	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6016	538	-0.0133	-0.0053	0.8238	430.0	1.5434	2.4113	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	70.35	-0.0133	-0.0094	somatic
28	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	80222032	86049758	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	545	35	-0.3673	-0.3134	0.8293	215.0	1.6558	2.8343	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	28.29	-0.3673	0.013	somatic
29	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	87980245	94186516	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	559	58	0.672	0.6449	0.5252	346.0	0.1327	0.0707	4	2	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	40.14	0.0018	0.058	somatic
30	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	94209556	96952093	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	607	89	-0.0771	-0.0151	0.8366	258.0	1.5398	2.4758	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	30.49	-0.0771	-0.0189	somatic
31	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	98515818	102958955	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	920	107	1.0894	1.1369	0.6623	486.2	0.6593	0.4867	6	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	84.51	-0.0178	0.0882	somatic
32	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	103302110	117331127	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3084	363	0.0888	0.0897	0.7435	317.5	1.1639	1.8837	2	0	cn-loh	1;4;5	0.4763	0.6647	0.7165	5	-0.43	41.08	0.0888	-0.0168	somatic
33	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	117467115	121793255	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	965	180	1.2598	1.2339	0.6357	1094.0	0.5469	0.3134	6	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	99.89	0.0398	-0.0544	somatic
34	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	121793504	121999828	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	215	17	0.8766	0.8872	0.6535	993.0	0.5721	0.3257	6	2	amp	1;3;4	0.4399	0.6647	0.6619	5	-0.43	32.86	-0.034	0.1323	somatic
35	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	121999815	124012929	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1118	189	0.058	0.0425	0.8326	329.5	1.6319	2.7076	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	43.51	0.058	-0.0421	somatic
36	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	124311830	133120661	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1207	259	1.1221	1.1305	0.6392	1093.0	0.5653	0.3374	6	2	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	100.06	-0.0039	-0.0079	somatic
37	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr12	133144436	133234376	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	39	10	-0.0083	-0.0352	0.8596	287.0	1.9169	3.7	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	11.25	-0.0083	0.1625	somatic
38	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	19173833	23203886	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	512	63	0.6396	0.6599	0.5258	414.7	0.1112	0.0124	4	2	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	36.57	0.0027	0.0641	somatic
39	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	23234571	25589727	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	586	122	-0.0003	0.0048	0.8239	291.0	1.5258	2.3597	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	33.31	-0.0003	-0.017	somatic
40	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	25699153	33439797	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1446	136	0.8075	0.8209	0.5594	787.0	0.2422	0.0868	5	2	amp	1;3;4;5	0.5019	0.6647	0.755	5	-0.43	77.72	-0.0022	-0.078	somatic
41	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	33524185	87678256	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3612	397	0.6028	0.6299	0.5338	380.0	0.2232	0.0464	4	2	amp	1;2	0.5293	0.6647	0.7964	5	-0.43	91.59	-0.0101	0.0945	somatic
42	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	91399036	99866404	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	707	68	1.2201	1.2197	0.6783	670.0	0.7524	0.6276	6	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	82.8	0.0001	0.1281	somatic
43	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	99870911	110164981	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	856	100	0.7078	0.7632	0.5323	421.0	0.1371	0.0478	4	2	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	52.34	-0.0051	0.0905	somatic
44	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr13	110164923	114326203	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	922	128	0.0662	0.0575	0.8304	354.5	1.5115	2.5024	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	35.62	0.0662	0.0329	somatic
45	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	18601119	20641739	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	333	75	1.2281	1.2035	0.9095	1341.0	2.2591	5.5992	6	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	69.25	0.087	-0.0271	somatic
46	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	20693564	23645372	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1166	146	0.0362	0.0335	0.8234	474.0	1.5412	2.4237	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	36.73	0.0362	-0.0103	somatic
47	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	23953787	34771676	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1212	121	1.1272	1.1536	0.6316	667.0	0.5691	0.342	6	2	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	99.76	0.0012	-0.0475	somatic
48	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	34773556	104052089	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	9651	1145	0.043	0.0515	0.8163	312.0	1.4817	2.2678	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	99.21	0.043	0.0063	somatic
49	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	104085751	105626674	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	643	91	-0.2943	-0.3002	0.8289	293.0	1.5659	2.4746	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	34.96	-0.2943	0.018	somatic
50	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	105626674	105647102	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	39	27	-0.5865	-0.5993	0.751	4527.0	1.198	2.0583	1	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	14.71	-0.0037	-0.0006	somatic
51	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	105647042	105774373	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	163	14	-0.7526	-0.7341	0.6282	2191.6	0.6908	0.5254	1	0	del	1;2	0.5293	0.6647	0.7964	5	-0.43	24.57	-0.3091	-0.2461	somatic
52	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	105774313	105852033	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	28	10	-0.741	-0.6519	0.8348	6096.0	1.6055	2.5994	1	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	14.26	-0.1582	0.5171	somatic
53	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr14	105855910	106874851	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	322	34	-0.1843	-0.2174	0.7511	2432.0	1.1538	1.7235	2	0	cn-loh	1;3;4;5	0.5019	0.6647	0.755	5	-0.43	15.28	-0.1843	-0.0153	somatic
54	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	20535569	56179376	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	7268	823	0.0137	0.0228	0.8102	406.5	1.4324	2.189	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	81.68	0.0137	0.0168	somatic
55	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	56243086	59492390	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	453	58	1.5026	1.5626	0.7559	1033.0	1.1049	1.2712	8	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	82.54	-0.0795	0.1511	somatic
56	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	59507215	65556923	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1178	156	0.0495	0.047	0.8215	227.0	1.5042	2.3268	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	37.34	0.0495	0.0336	somatic
57	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	65558627	76471361	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2511	173	1.1447	1.1653	0.6433	760.0	0.5675	0.341	6	2	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	145.65	0.0036	-0.0001	somatic
58	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	76504813	86256954	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1546	218	0.7527	0.7594	0.5391	532.0	0.2106	0.0336	4	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	74.84	0.0174	0.1221	somatic
59	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	86256939	88913342	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2010	279	1.1049	1.1349	0.6291	12618.0	0.5544	0.3115	6	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	126.35	-0.0023	-0.0279	somatic
60	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	89116268	89910841	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	423	111	-0.0251	-0.0073	0.837	430.0	1.6423	2.7243	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	33.95	-0.0251	-0.0048	somatic
61	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	89912729	90091659	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	67	6	0.9336	0.9191	0.6332	1063.0	0.5352	0.3056	6	2	amp	1;3;5	0.4541	0.6647	0.6831	5	-0.43	19.47	0.0014	0.0363	somatic
62	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	90099068	92630403	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	537	62	1.5344	1.5196	0.7107	877.0	0.8703	0.7924	8	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	90.87	-0.0477	-0.0826	somatic
63	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	92655324	99386147	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	619	72	0.6345	0.6576	0.5151	1745.0	0.072	0.0046	4	2	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	39.88	-0.0024	0.0413	somatic
64	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr15	99633063	101819125	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	355	71	0.0739	0.1906	0.8022	325.0	1.4639	2.2419	2	0	cn-loh	1;2;5	0.5913	0.6647	0.8896	5	-0.43	23.29	0.0739	-0.0034	somatic
65	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	47432	11256305	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4392	557	-0.1659	-0.1715	0.8286	378.0	1.5614	2.5092	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	78.1	-0.1659	0.0215	somatic
66	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	11256994	27346541	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2781	415	0.1001	0.115	0.8187	415.0	1.5524	2.5186	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	61.75	0.1001	0.0284	somatic
67	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	27346423	27359043	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	25	12	-0.0341	0.0182	0.8208	1411.0	1.645	2.7102	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	10.49	-0.0341	-0.0127	somatic
68	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	27360696	46663177	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2140	148	-0.0602	-0.0708	0.832	471.0	1.6098	2.6815	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	38.97	-0.0602	-0.0393	somatic
69	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	46668901	57110957	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1536	171	0.6885	0.7013	0.8918	604.0	2.0659	4.3103	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	87.41	-0.0244	-0.0129	somatic
70	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	57113262	71929698	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3137	276	0.34	0.3491	0.8592	580.0	1.7983	3.3573	3	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	76.47	-0.0479	0.0124	somatic
71	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	71930009	72124953	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	143	78	0.4134	0.3836	0.8517	625.0	1.8587	3.5383	3	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	33.0	0.0334	0.0019	somatic
72	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	72125213	72787611	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	72	1	0.2199	0.2642	0.8354	486.0	1.9105		5	0	amp	4;5	0.1097	0.6647	0.1651	5	-0.43	4.71	0.0	0.0	somatic
73	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	72787547	72787787	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3	2	0.3014	0.2092	0.8618	9292.0	1.8282	3.3397	4	0	amp	2;3;4	0.2362	0.6647	0.3554	5	-0.43	1.32	-0.0046	0.0	somatic
74	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	72787787	81101329	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	851	99	0.3526	0.3368	0.867	496.0	1.904	3.6793	3	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	45.11	-0.0474	-0.0036	somatic
75	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	81108536	85921556	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	940	264	0.3499	0.355	0.8675	670.0	1.8939	3.6134	3	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	66.31	-0.0501	0.0057	somatic
76	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	85921556	86510652	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	10	5	-0.3333	-0.2264	0.8478	10574.0	1.7856	3.1946	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	8.15	-0.3333	0.1073	somatic
77	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	86510697	89739325	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1062	110	0.1428	0.1572	0.8665	452.0	1.8941	3.6504	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	40.49	0.1428	0.2305	somatic
78	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	89739214	89799164	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	100	74	0.2976	0.3925	0.8615	3148.0	1.8757	3.5341	3	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	32.33	-0.0903	0.0504	somatic
79	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr16	89799135	90075935	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	192	57	0.2017	0.22	0.8619	484.7	1.8334	3.4119	3	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	28.21	-0.1862	0.0318	somatic
80	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	137555	7674778	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3246	634	0.6331	0.6426	0.8957	766.5	2.168	4.7893	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	141.04	-0.0798	0.0318	somatic
81	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	7674789	7676596	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	31	7	0.0152	0.0862	0.9019	14001.0	2.2321	4.9814	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	11.8	-0.3988	0.2735	somatic
82	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	7676497	16789401	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2555	251	0.6921	0.7073	0.8801	794.5	2.0755	4.5036	4	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	108.38	0.0116	0.0093	somatic
83	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	16939533	17206302	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	52	11	0.7133	0.722	0.9092	1001.0	2.295	5.3223	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	20.02	-0.022	0.0893	somatic
84	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	17207212	17239810	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	67	17	0.5601	0.6154	0.905	5121.5	2.2622	5.1125	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	21.94	-0.1752	0.0536	somatic
85	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	17242188	18264757	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	443	53	0.7646	0.7781	0.915	694.0	2.4312	5.9827	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	53.27	0.0293	0.1566	somatic
86	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	18274765	18889902	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	165	60	1.3663	1.3794	0.9207	1422.0	2.5024	6.755	7	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	58.35	-0.0461	-0.269	somatic
87	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	18911071	22524155	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	461	122	1.4068	1.4107	0.7158	1048.5	0.5291	3.0717	7	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	78.88	-0.0056	0.1116	somatic
88	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	27294345	31163395	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1310	87	0.0014	0.0054	0.8419	378.0	1.6343	2.7188	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	30.67	0.0014	0.029	somatic
89	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	31166841	31431938	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	321	1	-1.5587	-1.4894	0.5851	94.0	0.4013		0	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	70.54	0.0178	0.0	somatic
90	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	31434017	39657070	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2005	142	0.0275	0.0388	0.8338	338.0	1.6242	2.6745	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	37.82	0.0275	-0.033	somatic
91	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	39656997	41065882	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1302	159	-0.0033	-0.0238	0.8381	571.0	1.6144	2.6177	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	40.94	-0.0033	0.0084	somatic
92	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	41084204	41302848	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	68	47	0.2863	0.3185	0.8557	1060.8	1.5916	2.796	3	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	24.98	-0.0937	0.0414	somatic
93	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	41307704	43039415	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1436	115	0.0037	0.0191	0.8397	586.8	1.6482	2.7632	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	35.08	0.0037	0.0207	somatic
94	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	43044289	43179492	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	296	74	0.0215	0.1432	0.8435	2496.0	1.6115	2.608	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	28.94	0.0215	0.0662	somatic
95	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	43180719	65961631	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	5827	690	-0.0032	0.0041	0.8338	437.0	1.594	2.6592	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	83.37	-0.0032	-0.0277	somatic
96	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	66005639	72124435	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	973	134	0.6766	0.6981	0.8992	456.0	2.1474	4.6327	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	73.21	-0.0363	0.0613	somatic
97	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	72124435	79115569	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2333	378	1.0769	1.0936	0.6694	958.0	0.7385	0.5356	6	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	134.06	-0.0303	0.1305	somatic
98	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr17	79115595	83094575	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1606	355	1.4138	1.4241	0.7167	1212.0	0.9606	0.9532	7	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	147.18	0.0014	0.1177	somatic
99	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	47389	909649	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	223	43	1.3468	1.3116	0.5929	786.0	0.3755	0.1669	7	3	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	51.01	-0.0656	0.0965	somatic
100	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	2538982	23257385	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1825	288	0.8002	0.7981	0.5528	468.8	0.2352	0.0559	5	2	amp	1;4;5	0.4763	0.6647	0.7165	5	-0.43	86.55	0.0225	-0.1045	somatic
101	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	23297988	49257119	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2677	272	0.0596	0.0941	0.7641	364.5	1.2937	1.9083	2	0	cn-loh	1;3;4;5	0.5019	0.6647	0.755	5	-0.43	38.47	0.0596	0.0299	somatic
102	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	49258364	55635897	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	555	106	0.6698	0.6716	0.5283	559.5	0.2178	0.0366	4	2	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	39.89	-0.0004	0.0796	somatic
103	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	56602942	58535680	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	258	35	0.1367	0.1414	0.8132	200.0	1.3587	1.9225	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	17.75	0.1367	0.0196	somatic
104	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	58535695	63126293	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	609	80	0.0026	0.0137	0.8228	423.0	1.4771	2.2013	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	26.98	0.0026	-0.0166	somatic
105	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	63126199	63321304	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	167	22	-0.2898	-0.3089	0.8217	12044.0	1.4884	2.2238	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	17.21	-0.2898	0.0074	somatic
106	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	63331748	68713968	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	300	47	0.1968	0.2092	0.8028	256.2	1.4639	2.346	3	0	amp	1;4;5	0.4763	0.6647	0.7165	5	-0.43	20.6	-0.1114	0.0382	somatic
107	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	68714905	72542213	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	175	18	0.9736	1.0313	0.6261	415.5	0.5604	0.324	6	2	amp	1;4;5	0.4763	0.6647	0.7165	5	-0.43	32.79	0.0083	-0.0215	somatic
108	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr18	72748997	80247372	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	579	96	0.0562	0.0527	0.8237	327.0	1.5025	2.2777	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	29.77	0.0562	-0.0157	somatic
109	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	281347	4110443	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2405	570	-0.1725	-0.1934	0.8155	327.0	1.5456	2.4998	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	72.6	-0.1725	0.0021	somatic
110	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	4110443	5206725	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	491	66	-0.0078	0.0655	0.7302	286.8	1.212	1.9749	2	0	cn-loh	1;3;4	0.4399	0.6647	0.6619	5	-0.43	15.54	-0.0078	0.0042	somatic
111	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	5206725	5215471	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	37	19	-0.3022	-0.2857	0.8277	3528.0	1.6262	2.653	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	14.44	-0.3022	0.0428	somatic
112	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	5215483	5245971	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	72	4	-0.2409	-0.1841	0.8389	1126.0	1.4785	2.1817	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	8.34	-0.2409	0.0239	somatic
113	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	5245936	6047511	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	341	43	0.7012	0.6741	0.563	720.0	0.1461	0.0153	5	2	amp	1;4	0.4143	0.6647	0.6233	5	-0.43	32.84	0.0039	-0.0333	somatic
114	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	6141487	7083558	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	497	90	-0.0497	-0.0719	0.8221	373.0	1.599	2.6184	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	28.61	-0.0497	-0.0239	somatic
115	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	7083534	7294463	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	137	33	0.0346	0.0077	0.8249	2936.0	1.5819	2.5073	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	17.8	0.0346	0.022	somatic
116	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	7439940	8909428	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	958	267	0.6513	0.6593	0.5668	765.0	0.148	0.0196	5	2	amp	1;3	0.3921	0.6647	0.5899	5	-0.43	51.53	-0.0161	-0.0082	somatic
117	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	8909395	8915019	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	17	11	-0.0246	0.0875	0.7029	4959.0	1.347	2.4663	2	0	cn-loh	1;3	0.3921	0.6647	0.5899	5	-0.43	5.69	-0.0246	0.0212	somatic
118	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	8915457	9860848	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	783	42	-0.0882	-0.0719	0.8488	583.5	1.6754	2.8217	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	22.97	-0.0882	0.0898	somatic
119	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	9913488	30445725	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	5963	870	0.6222	0.6134	0.5311	659.0	0.1702	0.0365	6	3	amp	2;4;5	0.2726	0.6647	0.4101	5	-0.43	121.49	-0.0055	0.0935	somatic
120	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	30534810	42234738	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4200	605	-0.0262	-0.045	0.7998	424.5	1.3132	1.9624	2	0	cn-loh	1;2;5	0.5913	0.6647	0.8896	5	-0.43	66.88	-0.0262	-0.0129	somatic
121	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	42236601	42363313	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	249	7	-1.797	-1.7563	0.5609	177.0	0.1456	0.0	0	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	71.63	-0.2205	0.1848	somatic
122	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	42368397	44428874	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	680	85	-0.0438	-0.039	0.7772	735.0	1.2835	1.8315	2	0	cn-loh	1;2;3	0.5549	0.6647	0.8349	5	-0.43	22.85	-0.0438	-0.031	somatic
123	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr19	44428904	58571441	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6838	1137	0.6507	0.6479	0.5331	654.0	0.1582	0.0245	4	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	136.09	-0.0066	0.1014	somatic
124	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	41522	29221537	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4135	464	-0.01	-0.0143	0.8344	363.0	1.6054	2.6332	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	68.41	-0.01	-0.0271	somatic
125	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	29221537	30459776	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	199	28	-0.1538	-0.0894	0.8319	3986.5	1.6118	2.6163	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	17.79	-0.1538	-0.0158	somatic
126	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	30525528	97714025	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	9268	1235	0.6604	0.6704	0.5401	697.0	0.1737	0.0415	5	2	amp	1	0.3665	0.6647	0.5514	5	-0.43	160.85	0.0283	-0.1071	somatic
127	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	97723987	132994285	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4593	634	0.0059	0.0217	0.8057	451.0	1.4162	2.1435	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	70.28	0.0059	-0.0102	somatic
128	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	133129984	148502518	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1237	146	0.4391	0.4836	0.5304	824.0	0.1565	0.0426	5	2	amp	2;5	0.2248	0.6647	0.3381	5	-0.43	39.08	0.0199	-0.0745	somatic
129	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	148510007	174246870	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3668	408	-0.0259	0.0029	0.8209	253.0	1.5198	2.3833	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	60.07	-0.0259	0.0323	somatic
130	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	174335042	181892704	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1832	146	1.361	1.3665	0.7473	1165.0	1.0729	1.1236	7	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	149.39	-0.0514	0.2734	somatic
131	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	181895992	213284676	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4254	377	1.0993	1.1248	0.9287	636.0	2.5294	6.4553	6	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	206.5	-0.0886	0.0822	somatic
132	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	213296000	227688336	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2741	280	0.6483	0.6462	0.8915	632.0	2.137	4.6345	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	110.65	-0.0646	-0.0153	somatic
133	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	227695879	231262415	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	509	80	1.2119	1.2107	0.9295	755.3	2.6186	6.9608	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	82.96	-0.0081	-0.0068	somatic
134	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	231270966	241071898	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1898	335	0.0115	0.0623	0.8409	519.5	1.6438	2.8094	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	60.14	0.0115	0.0276	somatic
135	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	241073254	241742624	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	362	52	0.6598	0.6619	0.8802	488.0	1.9911	4.0364	4	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	42.61	-0.0207	0.0025	somatic
136	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr2	241743614	241873273	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	97	5	-0.4832	-0.472	0.8194	430.0	1.352	1.897	1	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	13.73	0.0996	0.3811	somatic
137	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr20	87677	25686480	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3095	508	0.0586	0.0626	0.8217	362.0	1.5113	2.3238	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	68.0	0.0586	-0.0273	somatic
138	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr20	31257614	63532720	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6864	749	0.8111	0.8071	0.5287	751.0	0.1422	0.021	6	3	amp	1	0.3665	0.6647	0.5514	5	-0.43	169.8	0.0178	0.0858	somatic
139	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr20	63533539	64273595	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	464	109	-0.1566	-0.1549	0.8288	424.0	1.5922	2.6014	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	33.47	-0.1566	0.0252	somatic
140	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	5117108	13631127	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	146	26	0.7124	0.6954	0.7298	932.0	0.5097	0.2784	5	1	amp	1;4;5	0.4763	0.6647	0.7165	5	-0.43	23.91	-0.0653	0.0801	somatic
141	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	14108933	26966087	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	472	74	1.2536	1.3001	0.9306	622.0	2.6042	6.8258	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	81.91	0.0336	0.0072	somatic
142	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	26966083	38299387	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1629	178	0.7537	0.7618	0.9019	685.5	2.1847	4.8414	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	96.78	0.0184	-0.0013	somatic
143	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	38299456	38381555	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	21	6	0.5828	0.6572	0.9018	9156.0	2.1563	4.653	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	12.82	-0.1525	0.0197	somatic
144	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	38381555	41435911	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	439	78	0.7752	0.7823	0.9057	541.0	2.2035	4.8773	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	57.06	0.0399	0.0386	somatic
145	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41435926	41483212	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	87	38	0.6663	0.7357	0.9024	1638.0	2.2083	4.8846	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	31.57	-0.069	0.0151	somatic
146	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41483212	41494252	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	73	35	0.6234	0.6929	0.8994	12898.5	2.2099	4.8821	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	29.31	-0.1119	-0.0058	somatic
147	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41494252	41496652	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	16	0	0.8361	0.8652					6	0	amp	1;3	0.3921	0.6647	0.5899	5	-0.43	8.45	0.0008	0.0	somatic
148	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41496652	41507812	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	89	13	0.3799	0.4085	0.9045	12867.5	2.2486	5.0712	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	18.63	-0.0341	0.3029	somatic
149	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41507812	41907835	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	126	41	0.6912	0.6446	0.9001	908.0	2.2027	4.8613	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	34.2	-0.0441	-0.0175	somatic
150	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	41909426	44216213	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	579	109	0.7762	0.7754	0.8991	629.5	2.1847	4.8192	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	65.44	0.0409	-0.0339	somatic
151	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	44216573	44228672	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	28	18	0.4655	0.511	0.8896	5915.5	2.1902	4.8107	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	18.81	0.0515	0.138	somatic
152	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	44228672	44627300	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	256	42	0.529	0.5127	0.8137	621.0	1.4158	3.2398	4	0	amp	1;3;4	0.4399	0.6647	0.6619	5	-0.43	28.49	0.003	0.021	somatic
153	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	44627390	44682121	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	23	35	0.6212	0.6805	0.9184	1191.5	2.2295	5.0587	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	29.56	-0.1141	0.2083	somatic
154	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr21	44697199	46664423	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	703	215	0.5967	0.5811	0.901	557.0	2.1481	4.7037	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	75.68	-0.1162	0.0848	somatic
155	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	15528276	18169947	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	319	56	0.0837	0.0901	0.8226	328.0	1.6069	2.6615	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	22.79	0.0837	-0.0232	somatic
156	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	18170712	20918246	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	747	75	0.6739	0.6739	0.8759	557.0	2.0494	4.2698	4	0	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	57.34	0.0037	0.0054	somatic
157	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	20918187	20952809	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	33	7	0.8245	0.8243	0.8841	21819.0	2.0513	4.213	5	0	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	16.12	-0.0493	0.0476	somatic
158	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	20952809	21710783	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	314	18	0.5795	0.5572	0.8127	1342.5	1.6122	4.0625	4	0	amp	1;3;5	0.4541	0.6647	0.6831	5	-0.43	28.73	0.0394	-0.019	somatic
159	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	21759609	21762009	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	20	5	0.4074	0.4842	0.8855	10885.0	2.1131	4.4669	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	10.27	-0.0066	0.0996	somatic
160	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	21762009	22162600	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	113	9	0.6951	0.7177	0.8792	581.0	1.9351	3.7594	4	0	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	22.08	0.0146	-0.004	somatic
161	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22162604	22215248	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	21	14	1.1517	1.1523	0.9258	8355.0	2.5546	6.5335	6	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	23.18	-0.0362	0.0621	somatic
162	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22244769	22687349	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	168	3	1.0669	1.0925	0.926	7823.0	2.5958	6.7353	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	36.02	0.069	0.1279	somatic
163	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22697932	22734964	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	35	32	1.0111	1.0329	0.9341	9469.2	2.5384	6.4469	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	33.71	0.0132	0.2534	somatic
164	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22734888	22855875	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	46	2	0.9387	0.9436	0.9249	7717.0	2.4553	6.0226	5	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	16.08	-0.0064	0.0	somatic
165	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22855815	22887912	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	79	25	0.9474	0.9781	0.9315	10024.5	2.4682	6.1207	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	33.76	-0.0505	0.2121	somatic
166	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22887836	22895923	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	112	0	0.7305	0.7775					5	0	amp	1;3;4	0.4399	0.6647	0.6619	5	-0.43	19.53	-0.0006	0.0	somatic
167	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22895923	22899592	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4	3	0.5732	0.8604	0.9234	11708.0	1.9175	2.8949	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	9.14	-0.1621	0.2927	somatic
168	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	22899559	23159014	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	61	13	0.9603	0.9901	0.9272	1581.5	2.5052	6.2762	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	26.37	-0.0376	0.1345	somatic
169	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	23159147	23181542	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	17	19	0.8737	0.8768	0.9342	1117.0	2.5951	6.7363	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	24.83	-0.1242	0.2394	somatic
170	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	23181509	23302560	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	296	1	0.6516	0.7527	0.921	21294.0	2.5406		4	0	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	28.32	-0.0057	0.0	somatic
171	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	23302560	23302920	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3	1	0.6383	0.5564	0.9205	28830.0	2.3726		4	0	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	2.79	0.0014	0.0	somatic
172	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	23302920	24183678	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	345	30	1.059	1.0594	0.9192	1781.5	2.3965	5.75	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	56.37	0.0611	0.0228	somatic
173	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	24184098	25678954	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	317	46	0.0528	0.0799	0.8234	448.0	1.4401	2.2605	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	20.67	0.0528	-0.0114	somatic
174	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	25685152	28733682	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	431	74	0.7825	0.8042	0.8849	547.0	2.0854	4.4682	4	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	53.78	0.0893	-0.0015	somatic
175	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	28734382	28742022	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	8	3	0.9405	1.0699	0.9018	5654.0	2.1679	4.694	5	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	10.22	-0.0046	0.0039	somatic
176	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	28742087	29050013	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	84	9	0.8732	0.8528	0.8875	611.0	1.9641	3.7886	5	0	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	23.66	-0.0265	-0.024	somatic
177	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	29050012	29057154	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	41	8	0.4845	0.4606	0.8931	8487.0	2.0909	4.3774	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	14.38	0.0705	0.1758	somatic
178	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	29057154	29683127	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	395	50	0.7574	0.7992	0.8908	1092.0	2.1059	4.4739	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	48.17	0.0445	-0.0149	somatic
179	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	29683108	29698165	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	31	10	0.4362	0.4723	0.892	11371.0	2.134	4.5552	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	14.75	0.0222	0.1655	somatic
180	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	29698165	36870534	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1375	253	0.753	0.7569	0.8869	770.5	2.087	4.402	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	95.98	0.0401	-0.059	somatic
181	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	36871620	36937814	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	93	20	0.2875	0.3192	0.8942	3889.0	2.0414	4.1741	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	20.36	-0.1265	0.1833	somatic
182	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	36937704	36938304	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	16	6	-0.1385	-0.1539	0.8934	11046.0	2.1498	4.6254	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	10.55	-0.1385	0.516	somatic
183	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	36938244	39043116	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	830	124	0.6648	0.6669	0.8939	783.2	2.1323	4.5992	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	67.58	-0.0481	0.013	somatic
184	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	39044090	39244802	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	86	35	0.5626	0.5625	0.8909	1114.5	2.1651	4.7024	4	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	28.04	-0.1306	0.0691	somatic
185	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	39244802	50267998	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2516	338	0.6492	0.6582	0.8858	670.0	2.0392	4.3128	4	0	amp	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	111.15	-0.044	0.0107	somatic
186	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr22	50270117	50782316	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	449	112	0.4371	0.444	0.8888	833.0	2.0652	4.3148	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	49.61	0.0231	0.1126	somatic
187	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	319726	12287582	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1383	157	0.0841	0.085	0.835	361.0	1.588	2.56	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	40.66	0.0841	-0.0229	somatic
188	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	12287582	12343136	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	405	118	0.0821	0.0768	0.8108	3465.0	1.5327	2.428	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	31.84	0.0821	0.0017	somatic
189	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	12343136	12591910	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	387	21	0.1073	0.1357	0.8323	648.0	1.5866	2.5303	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	15.46	0.1073	-0.0317	somatic
190	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	12592030	12663876	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	144	29	0.1389	0.1692	0.8367	3702.5	1.636	2.6753	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	18.09	0.1389	0.0184	somatic
191	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	12663876	111649825	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	12969	1221	-0.0288	-0.0245	0.8128	344.5	1.4603	2.3597	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	100.72	-0.0288	-0.0146	somatic
192	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	111675179	129977207	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3334	434	0.0178	-0.0031	0.8316	392.0	1.5915	2.5614	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	65.41	0.0178	0.0435	somatic
193	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	130091255	130484861	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	196	76	-0.1104	-0.1651	0.838	1009.0	1.6845	2.8445	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	28.7	-0.1104	0.0159	somatic
194	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	130560318	134795719	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	854	130	-0.0893	-0.0809	0.8319	235.0	1.6026	2.6883	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	36.16	-0.0893	0.0339	somatic
195	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	134824203	134951712	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	12	7	0.2858	0.3123	0.8491	2881.5	1.7533	3.0756	3	0	amp	1;2;5	0.5913	0.6647	0.8896	5	-0.43	9.47	-0.0879	0.0375	somatic
196	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	134951712	136336657	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	157	13	0.0386	0.0447	0.8141	819.0	1.5412	2.3825	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	10.6	0.0386	0.009	somatic
197	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	136336657	185052045	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	5754	591	-0.0279	-0.0057	0.8048	283.0	1.4666	2.3174	2	0	cn-loh	1;2;5	0.5913	0.6647	0.8896	5	-0.43	67.3	-0.0279	0.0099	somatic
198	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	185082947	187742291	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	840	55	0.1045	0.1388	0.7636	267.0	1.4275	2.4168	2	0	cn-loh	1;3;4;5	0.5019	0.6647	0.755	5	-0.43	18.46	0.1045	0.0201	somatic
199	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	187742211	187744596	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	43	10	-0.0947	-0.0217	0.8145	9219.0	1.5281	2.3372	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	9.51	-0.0947	0.0313	somatic
200	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	187744545	192408249	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	367	78	0.0194	-0.0032	0.8213	431.0	1.5588	2.4571	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	26.48	0.0194	-0.0265	somatic
201	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	192727150	195811836	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	463	99	0.7324	0.7485	0.5525	611.0	0.2706	0.0924	5	2	amp	1;5	0.4285	0.6647	0.6446	5	-0.43	39.97	0.0163	-0.0838	somatic
202	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	195864097	196198354	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	124	19	0.0649	0.0249	0.8037	948.2	1.5098	2.3478	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	12.29	0.0649	-0.0112	somatic
203	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	196198406	197194605	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	295	56	1.3131	1.3415	0.6575	728.0	0.64	0.4194	6	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	57.74	0.0931	0.0356	somatic
204	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr3	197282665	198169878	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	182	18	0.7878	0.7275	0.5596	443.0	0.4317	0.2351	5	2	amp	1;4;5	0.4763	0.6647	0.7165	5	-0.43	26.9	0.0101	-0.078	somatic
205	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	53399	866459	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	164	54	1.3781	1.3688	0.7109	1212.0	0.8723	0.8025	7	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	46.43	-0.0343	0.0894	somatic
206	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	866449	17909391	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2771	458	0.6758	0.6666	0.5305	635.3	0.1766	0.0277	6	3	amp	2;3;4;5	0.2982	0.6647	0.4486	5	-0.43	89.94	0.001	0.0905	somatic
207	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	17961884	26861376	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	681	96	1.0943	1.1087	0.6476	609.0	0.6103	0.3849	6	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	73.02	-0.0129	0.027	somatic
208	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	26919474	38690064	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	323	42	-0.0063	0.0031	0.8284	304.0	1.4907	2.3514	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	19.97	-0.0063	0.0153	somatic
209	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	38690064	38690544	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4	2	0.3204	0.3171	0.8342	7146.5	1.6213	2.6324	4	0	amp	2;3;5	0.2504	0.6647	0.3767	5	-0.43	1.62	-0.002	0.0	somatic
210	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	38690544	38701040	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	42	1	0.0305	0.0085	0.8234	8311.0	1.5993		3	0	amp	4	0.0478	0.6647	0.0719	5	-0.43	0.5	-0.0036	0.0	somatic
211	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	38701040	38701400	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3	2	0.1801	0.1661	0.852	2551.0	1.6949		5	0	amp	3;5	0.0876	0.6647	0.1317	5	-0.43	0.79	0.0021	0.0	somatic
212	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	38703137	41268105	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	548	49	0.0927	0.1209	0.7982	323.0	1.3976	2.1453	2	0	cn-loh	1;2;4	0.5771	0.6647	0.8683	5	-0.43	19.56	0.0927	0.0144	somatic
213	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	41360828	41697249	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	69	10	1.0425	1.0192	0.5987	469.0	0.346	0.1807	5	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	22.0	0.0446	0.0272	somatic
214	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	41739082	41745265	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	15	6	0.058	0.2031	0.828	887.0	1.6207	2.6264	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	7.65	0.058	0.0315	somatic
215	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	41745265	49061941	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	797	101	-0.1353	-0.1095	0.8258	196.0	1.4785	2.2741	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	31.86	-0.1353	-0.0141	somatic
216	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr4	51843177	190027226	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	13024	1335	0.6022	0.6155	0.5318	431.0	0.1671	0.0309	4	2	amp	1;2	0.5293	0.6647	0.7964	5	-0.43	173.71	-0.0107	0.0889	somatic
217	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	92183	195410	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	63	1	-1.7231	-1.6911	0.5403	248.0	0.0831		0	0	del	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	34.55	-0.1466	0.0	somatic
218	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	205254	19838986	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1632	312	0.0109	-0.0048	0.819	348.0	1.5548	2.4894	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	52.23	0.0109	0.0269	somatic
219	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	21751733	34687024	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	555	66	1.1562	1.1105	0.6373	721.0	0.5254	0.3222	6	2	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	69.35	0.0151	-0.0269	somatic
220	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	34687612	138782039	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	10966	1220	0.6489	0.658	0.5469	447.0	0.2579	0.0845	5	2	amp	1	0.3665	0.6647	0.5514	5	-0.43	171.96	0.0168	-0.0872	somatic
221	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	138783153	168218990	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4719	603	0.0457	0.0439	0.8336	542.0	1.6209	2.6642	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	78.46	0.0457	-0.0253	somatic
222	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr5	168226046	181367550	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2627	371	0.6312	0.6276	0.533	630.0	0.1845	0.0352	6	3	amp	2;4;5	0.2726	0.6647	0.4101	5	-0.43	81.81	0.0035	0.1004	somatic
223	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	304553	14136067	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1443	182	1.5731	1.5461	0.9317	1023.8	2.6828	7.6383	8	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	166.54	-0.009	-0.2367	somatic
224	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	14136067	14136427	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3	2	1.5893	1.6134	0.9453	31645.0	2.8607	8.181	8	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	6.95	0.0072	0.0	somatic
225	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	14136427	26055906	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1056	171	1.788	1.7879	0.9497	1221.5	2.9368	8.7091	9	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	165.66	0.054	-0.0207	somatic
226	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	26055805	26124498	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	62	26	1.5574	1.5439	0.9411	4562.0	2.8754	8.2805	8	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	42.0	-0.0247	-0.0655	somatic
227	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	26124481	26383928	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	166	11	1.5036	1.5517	0.9482	5231.5	2.8469	8.1419	8	0	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	52.62	-0.0785	0.0713	somatic
228	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	26384961	29676995	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	766	32	1.2764	1.3027	0.9311	1247.0	2.4564	6.1044	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	93.96	0.0564	0.0243	somatic
229	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	29722888	29828122	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	51	25	0.8604	0.9558	0.9313	9750.0	2.6269	6.9018	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	30.44	-0.1375	0.2089	somatic
230	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	29828027	29830473	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	18	1	0.6592	0.7023	0.9282	3162.0	2.6601		4	0	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	7.06	0.0019	0.0	somatic
231	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	29830767	29953384	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	43	123	0.9694	1.044	0.9425	22070.5	2.6204	6.8572	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	64.43	-0.2506	0.2346	somatic
232	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	30061482	31034938	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	621	79	1.1964	1.2066	0.9299	1412.0	2.5058	6.3023	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	88.21	-0.0236	0.0071	somatic
233	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	31111384	31539271	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	154	169	1.167	1.2204	0.9357	1753.6	2.5737	6.6516	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	78.68	-0.053	0.1019	somatic
234	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	31539211	32196999	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1043	104	1.1335	1.1418	0.9232	1440.8	2.5491	6.6847	6	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	105.44	-0.0544	0.0125	somatic
235	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	32196978	32369970	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	167	75	0.9378	1.0177	0.9308	4135.5	2.5546	6.5382	5	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	54.55	-0.0601	0.1968	somatic
236	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	32369910	32407144	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	17	1	1.2882	1.3672	0.9116	509.0	1.8606		6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	13.42	0.0682	0.0	somatic
237	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	32439835	32814439	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	80	122	1.1188	1.154	0.9423	10823.7	2.5791	6.7284	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	66.96	-0.1012	0.2286	somatic
238	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	32814401	33005212	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	188	28	1.2013	1.1982	0.9298	2280.0	2.5652	6.5941	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	49.8	-0.0187	0.0101	somatic
239	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	33005452	33008197	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	22	17	1.0876	1.1446	0.9348	11570.0	2.5925	6.727	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	25.55	-0.1324	0.0987	somatic
240	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	33008141	33080935	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	48	10	1.1973	1.1991	0.9312	11011.5	2.4369	5.9081	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	26.7	-0.0227	0.0409	somatic
241	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	33080864	55351476	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	4951	630	1.1688	1.1576	0.9282	933.0	2.5675	6.6358	6	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	244.08	-0.0512	-0.0235	somatic
242	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	55351463	57318553	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	428	36	-0.1014	-0.0686	0.8353	202.0	1.5595	2.5352	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	19.68	-0.1014	-0.0348	somatic
243	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	57318498	89412018	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2578	271	0.6108	0.6171	0.5275	312.0	0.2015	0.0394	4	2	amp	1;2	0.5293	0.6647	0.7964	5	-0.43	78.36	-0.0021	0.0649	somatic
244	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	89566926	90561704	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	340	26	1.2164	1.1523	0.6267	1059.0	0.567	0.4064	6	2	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	56.88	0.0285	-0.0829	somatic
245	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	90568510	104795722	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	663	85	-0.188	-0.1606	0.8349	294.5	1.5932	2.5821	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	31.71	-0.188	-0.0281	somatic
246	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	104796623	108664847	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	548	64	0.5646	0.5633	0.5514	434.0	0.2354	0.1555	5	2	amp	2;3;4;5	0.2982	0.6647	0.4486	5	-0.43	33.49	0.0313	-0.0387	somatic
247	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	108854227	112065070	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	832	59	0.0649	0.0801	0.7958	283.0	1.429	2.237	2	0	cn-loh	1;2;4	0.5771	0.6647	0.8683	5	-0.43	20.87	0.0649	-0.0035	somatic
248	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	112068188	134259891	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2929	261	-0.0876	-0.0637	0.8257	315.5	1.5438	2.4274	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	50.62	-0.0876	-0.0027	somatic
249	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	134259891	135207106	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	169	26	0.0756	0.0722	0.8389	340.0	1.6857	2.8806	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	16.7	0.0756	0.0044	somatic
250	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	135207106	135217546	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	70	12	0.0201	0.0445	0.8215	4746.0	1.6108	2.5996	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	10.59	0.0201	0.0017	somatic
251	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	135217546	150786525	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1981	136	-0.01	0.0063	0.8312	446.0	1.6222	2.6534	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	36.6	-0.01	0.0431	somatic
252	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	150795819	152103283	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	418	39	-0.055	0.0106	0.8371	849.0	1.6262	2.6739	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	20.46	-0.055	0.0071	somatic
253	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	152122185	152148265	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	67	28	-0.0119	0.0586	0.8365	1417.5	1.6135	2.6132	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	17.19	-0.0119	0.0089	somatic
254	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr6	152148256	170584636	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2701	398	0.0691	0.0707	0.8243	446.0	1.5383	2.4263	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	61.31	0.0691	-0.0053	somatic
255	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	193154	5605387	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1195	229	1.6181	1.6089	0.5712	1587.0	0.2677	0.099	8	3	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	141.52	0.036	-0.1848	somatic
256	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	5605383	11062117	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	691	101	1.8808	1.9051	0.5991	1987.5	0.3794	0.1525	10	4	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	125.12	0.0094	0.0164	somatic
257	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	11102434	13943742	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	529	56	1.1652	1.1662	0.6137	510.0	0.5018	0.2592	6	2	amp	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	68.0	0.0241	-0.1333	somatic
258	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	13943742	15390741	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	409	116	1.0856	1.1067	0.6341	6444.0	0.6015	0.3718	6	2	amp	1;2;3	0.5549	0.6647	0.8349	5	-0.43	56.68	0.0084	0.0012	somatic
259	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	15390681	27246416	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1295	151	1.5283	1.5367	0.7061	895.0	0.8464	0.7691	8	2	high-amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	140.5	-0.0538	-0.1046	somatic
260	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	27526176	42909877	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1413	226	0.7426	0.7295	0.5305	435.5	0.2157	0.0412	4	2	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	70.55	0.0073	0.0839	somatic
261	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	42909875	55019133	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1335	188	0.0413	0.0387	0.802	456.5	1.3827	2.0156	2	0	cn-loh	1;2;5	0.5913	0.6647	0.8896	5	-0.43	37.82	0.0413	0.0022	somatic
262	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	55019133	158138541	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	15095	1401	0.6513	0.6569	0.5407	744.5	0.1264	0.0195	5	2	amp	1	0.3665	0.6647	0.5514	5	-0.43	202.37	0.0192	-0.1037	somatic
263	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr7	158166911	159144810	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	180	63	0.1516	0.1291	0.84	454.2	1.5029	2.3151	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	26.43	0.1516	0.0184	somatic
264	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	166085	31096836	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3564	616	-0.0262	-0.0293	0.8282	392.8	1.5897	2.5746	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	76.77	-0.0262	0.0194	somatic
265	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	31096754	32725075	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1023	149	-0.0642	-0.088	0.8259	2902.0	1.5416	2.3961	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	38.29	-0.0642	0.0288	somatic
266	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	32725075	32767457	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	297	8	-0.1381	-0.145	0.8194	3472.5	1.557	2.491	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	10.45	-0.1381	-0.0145	somatic
267	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	32767457	43356929	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2151	59	-0.0632	-0.0526	0.8254	582.0	1.554	2.5084	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	24.67	-0.0632	0.0071	somatic
268	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	47260901	141166402	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	8514	800	0.6474	0.6491	0.5306	494.0	0.1509	0.0255	4	2	amp	1;2;4	0.5771	0.6647	0.8683	5	-0.43	150.97	-0.0099	0.0867	somatic
269	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr8	141167963	145054212	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1793	169	0.4231	0.4238	0.5275	705.0	0.1721	0.0235	6	3	amp	2	0.1628	0.6647	0.245	5	-0.43	45.3	0.0164	0.0801	somatic
270	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	17350	5519251	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	918	140	-0.0221	0.001	0.8099	587.0	1.4667	2.175	2	0	cn-loh	1;2;3;4	0.6027	0.6647	0.9068	5	-0.43	33.82	-0.0221	0.0215	somatic
271	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	5519191	5522234	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	32	11	-0.1603	-0.0959	0.7999	2627.8	1.4299	1.9899	2	0	cn-loh	1;2;5	0.5913	0.6647	0.8896	5	-0.43	9.44	-0.1603	0.0108	somatic
272	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	5522174	15175171	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	911	62	-0.1098	-0.1103	0.8162	357.0	1.4693	2.1779	2	0	cn-loh	1;2;3;5	0.6169	0.6647	0.9281	5	-0.43	24.47	-0.1098	0.0086	somatic
273	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	15177675	19786611	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	500	88	0.6496	0.6812	0.5724	467.0	0.4795	0.3675	5	2	amp	1;3	0.3921	0.6647	0.5899	5	-0.43	37.0	-0.0178	0.0066	somatic
274	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	19786628	35754181	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	2065	257	0.059	0.087	0.7688	462.0	1.3032	1.9055	2	0	cn-loh	1;2	0.5293	0.6647	0.7964	5	-0.43	38.23	0.059	-0.014	somatic
275	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	35792357	68387531	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1200	105	0.6629	0.6645	0.5691	1127.0	0.1114	0.0161	5	2	amp	1;3	0.3921	0.6647	0.5899	5	-0.43	58.24	-0.0045	0.0062	somatic
276	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	68387467	83977827	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1600	208	0.6993	0.6862	0.8993	543.0	2.1236	4.5641	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	94.43	-0.036	-0.0341	somatic
277	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	83978141	84975906	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	866	69	0.6756	0.6913	0.9018	3350.0	2.1959	4.8843	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	62.31	-0.0597	0.0142	somatic
278	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	85007028	127711941	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6286	670	0.716	0.7046	0.8986	709.0	2.1838	4.8295	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	182.1	-0.0193	-0.0376	somatic
279	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	127712190	127789865	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	109	26	0.6354	0.6253	0.906	922.0	2.2833	5.2663	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	28.47	-0.0999	0.0501	somatic
280	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	127789865	127803053	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	9	5	0.3067	0.5834	0.8677	16090.0	2.0145	4.1936	3	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	8.76	-0.0933	0.032	somatic
281	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	127804284	128656614	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	537	40	0.0693	0.0799	0.8293	409.0	1.6053	2.6188	2	0	cn-loh	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	20.06	0.0693	0.028	somatic
282	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	128656627	132888356	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1550	174	0.7076	0.7069	0.9004	666.8	2.2141	4.9557	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	91.01	-0.0277	-0.0186	somatic
283	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	132888298	132911622	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	115	26	0.6546	0.7495	0.8996	5434.0	2.2103	4.8902	4	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	28.59	-0.0807	-0.0074	somatic
284	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	132912254	136494736	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1222	284	0.5721	0.5671	0.8952	574.0	2.1412	4.7856	4	0	amp	1;2;4;5	0.6391	0.6647	0.9615	5	-0.43	87.73	-0.1408	0.022	somatic
285	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	136494638	136497278	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	70	6	-0.1904	-0.1129	0.9029	13864.0	2.2285	4.9645	2	0	cn-loh	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	11.69	-0.1904	0.6207	somatic
286	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	136497218	136510844	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	157	3	-0.0464	-0.0205	0.9117	13343.0	2.3096	5.3356	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	8.26	-0.4604	0.3893	somatic
287	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	136510725	136673801	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	165	36	0.0614	0.1617	0.9018	4651.2	2.2243	4.9657	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	26.75	-0.3526	0.2674	somatic
288	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chr9	136673838	138233832	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	1022	126	0.4705	0.4821	0.881	709.7	2.0615	4.5631	3	0	amp	1;2;3;4;5	0.6647	0.6647	1.0	5	-0.43	58.6	0.0565	0.0337	somatic
289	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chrX	2853959	3033385	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	55	8	0.8752	0.9031	0.5302	1873.0	0.1946	0.0311	6	3	amp	1;4	0.4143	0.6647	0.6233	5	-0.43	16.4	0.0044	0.1025	somatic
290	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chrX	3068047	57910412	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6589	338	-0.029	-0.03	0.7946	371.0	1.373	2.1978	2	0	cn-loh	1;2;4	0.5771	0.6647	0.8683	5	-0.43	48.96	-0.029	-0.0048	somatic
291	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chrX	63350078	103825780	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	3930	120	0.6333	0.6469	0.5622	535.0	0.2475	0.116	5	2	amp	1	0.3665	0.6647	0.5514	5	-0.43	100.39	0.0012	-0.022	somatic
292	1136_7F2-T1-TDNA-1_B23KCHGLT4_1_vs_1136_7F2-N1-BDNA-1_B23MHTGLT4_1	chrX	104166747	155545278	1136_7F2-T1-TDNA-1_B23KCHGLT4_1	1136_7F2-N1-BDNA-1_B23MHTGLT4_1	6179	343	1.0353	1.0408	0.6533	805.0	0.6192	0.4021	6	2	amp	1;2	0.5293	0.6647	0.7964	5	-0.43	206.8	-0.0064	0.0794	somatic