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1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1_segments.tsv
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s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_cnv/calls/somatic_cnv_clinical_2674-0607-0342__44c19e3--20260607-034211/variant_calling/somatic_cnv/1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1/segments/1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1_segments.tsv
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somatic_cnv_clinical_2674-0607-0342
Published
Jun 06, 2026 11:12 PM

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seg_id specimen_id chrom start end tumor_sample_id normal_sample_id n_probes n_het_sites cnlr_median cnlr_wmean mean_mbaf median_het_depth mean_valor mafR tcn lcn call clone_subset clone_purity purity clonal_frac n_clones dipLogR z_score residual_lr residual_lor sample_type
1 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr1 69765 3611259 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1266 284 0.3004 0.2934 0.539 1337.5 0.1929 0.0403 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 25.42 -0.0464 -0.0082 somatic
2 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr1 3624995 55098607 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 13603 1434 0.5006 0.5081 0.5358 1235.0 0.1796 0.0409 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 136.21 0.0623 -0.0544 somatic
3 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr1 55099731 107421188 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 5291 425 0.3493 0.3672 0.548 550.5 0.2539 0.0837 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 59.58 0.0025 0.0159 somatic
4 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr1 107430720 247491929 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 22709 2706 0.482 0.474 0.5346 991.5 0.1722 0.0367 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 169.49 0.0437 -0.0618 somatic
5 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr1 247491970 248918363 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 360 100 0.2704 0.2624 0.575 2895.8 0.2041 0.0575 4 1 amp 1 0.1812 0.2367 0.7654 2 -0.526 13.69 0.0302 -0.0217 somatic
6 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr10 47057 14838489 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1327 265 0.611 0.6164 0.5386 866.5 0.2038 0.042 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 51.99 0.0519 0.1276 somatic
7 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr10 14839895 68073108 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 4913 513 0.4106 0.4136 0.5418 850.0 0.1837 0.0407 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 67.35 -0.0277 -0.0349 somatic
8 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr10 68121384 133626762 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 10934 1509 0.4958 0.504 0.5374 978.8 0.1828 0.0418 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 121.11 0.0575 -0.0507 somatic
9 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr11 193697 2445364 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1406 246 0.2508 0.2552 0.5579 1357.0 0.2025 0.0524 3 1 amp 1;2 0.2367 0.2367 1.0 2 -0.526 23.2 0.0894 -0.0014 somatic
10 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr11 2445381 88567548 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 14906 1636 0.4653 0.4612 0.541 1030.0 0.1871 0.0427 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 132.78 0.027 -0.0356 somatic
11 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr11 88567554 90215300 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 214 21 -0.0495 -0.0266 0.551 535.0 0.2024 0.0332 2 0 cn-loh 2 0.0555 0.2367 0.2346 2 -0.526 2.48 -0.0495 0.0591 somatic
12 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr11 90218070 108431882 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2525 284 0.3477 0.3446 0.5407 720.0 0.173 0.0484 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 40.97 0.0009 -0.0093 somatic
13 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr11 108461429 134387716 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 4583 489 0.5151 0.5231 0.5374 1006.3 0.1755 0.0403 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 81.36 -0.044 0.1247 somatic
14 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 66830 16036820 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 4679 564 0.5265 0.5222 0.5316 1380.0 0.1212 0.0302 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 83.96 -0.0326 0.1051 somatic
15 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 16189655 21936731 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 775 75 0.0655 0.1321 0.5349 558.0 0.1616 0.0305 4 1 amp 2 0.0555 0.2367 0.2346 2 -0.526 4.75 -0.0125 0.0008 somatic
16 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 22046281 49024183 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3575 370 0.3695 0.3775 0.5413 616.0 0.189 0.0485 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 51.73 0.0227 -0.0093 somatic
17 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 49024523 49060684 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 592 0 0.0295 0.0619 3 0 amp 2 0.0555 0.2367 0.2346 2 -0.526 1.67 -0.01 0.0 somatic
18 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 49060684 57089234 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3660 307 0.5278 0.5375 0.5393 1350.0 0.167 0.0319 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 74.47 -0.0313 0.1358 somatic
19 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 57089234 103478484 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 5772 465 0.378 0.3823 0.5253 575.0 0.1574 0.0382 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 66.88 0.0312 -0.0747 somatic
20 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr12 103587426 133234376 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 6595 666 0.5309 0.5285 0.5356 873.5 0.2074 0.0504 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 100.52 -0.0282 0.1156 somatic
21 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr13 19173833 114326203 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 8553 973 0.8123 0.8158 0.6272 816.5 0.5218 0.2954 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 178.37 0.0383 -0.0761 somatic
22 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr14 18601119 104085871 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 12175 1356 0.5244 0.522 0.5338 849.0 0.1607 0.0347 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 134.9 -0.0347 0.108 somatic
23 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr14 104092573 105603266 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 625 139 0.1916 0.1824 0.5396 1435.3 0.0979 0.0197 7 2 high-amp 2 0.0555 0.2367 0.2346 2 -0.526 11.77 0.0041 -0.0088 somatic
24 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr14 105604683 105769763 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 160 55 -0.2674 -0.2681 0.5614 10938.0 0.1109 0.0138 1 0 del 1;2 0.2367 0.2367 1.0 2 -0.526 8.89 -0.0857 -0.0309 somatic
25 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr14 105769798 105775333 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 66 23 -0.291 -0.3338 0.6393 16863.0 0.2991 0.075 0 0 del 1;2 0.2367 0.2367 1.0 2 -0.526 8.39 0.0986 0.5662 somatic
26 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr14 105775273 106874851 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 337 24 0.1148 0.0759 0.5342 8919.0 0.1324 0.029 5 1 amp 2 0.0555 0.2367 0.2346 2 -0.526 5.12 -0.0006 -0.0255 somatic
27 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr15 20535569 85741503 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 12727 1451 0.4848 0.4973 0.5315 808.0 0.1563 0.0332 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 127.5 0.0465 -0.077 somatic
28 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr15 85743469 88147084 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1882 128 0.1552 0.1688 0.5258 15894.0 0.0713 0.0062 6 2 amp 2 0.0555 0.2367 0.2346 2 -0.526 15.87 0.0033 -0.0031 somatic
29 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr15 88147084 101819125 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2142 264 0.5372 0.5443 0.5309 1225.0 0.1475 0.0326 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 57.95 -0.0219 0.101 somatic
30 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr16 47432 10877437 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 4121 565 0.3714 0.3719 0.547 1107.0 0.1974 0.0472 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 56.2 0.0246 0.0219 somatic
31 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr16 10877543 11256185 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 237 31 0.042 0.0948 0.5204 11199.0 0.1216 0.0181 3 1 amp 2 0.0555 0.2367 0.2346 2 -0.526 1.79 0.0025 0.0201 somatic
32 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr16 11256185 23661285 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2354 162 0.5982 0.6163 0.5373 770.0 0.1936 0.0366 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 67.6 0.0391 0.1207 somatic
33 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr16 23665621 90075935 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 10583 1423 0.4835 0.487 0.53 1278.5 0.1271 0.0198 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 116.0 0.0452 -0.0773 somatic
34 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr17 137555 83094575 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 24448 3269 0.4934 0.5041 0.5369 1261.2 0.1579 0.0321 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 180.21 0.0551 -0.0497 somatic
35 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr18 47389 26547933 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2524 255 0.9258 0.9184 0.6156 950.5 0.472 0.2493 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 109.44 -0.0352 -0.0512 somatic
36 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr18 26548016 80247372 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 4768 613 0.8428 0.8349 0.6112 1032.0 0.4938 0.2616 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 137.59 -0.0277 0.0342 somatic
37 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr19 110794 58571441 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 23404 3378 0.4202 0.4038 0.5349 1177.5 0.155 0.0305 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 150.35 -0.0181 -0.0585 somatic
38 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 41522 86846788 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 11980 1402 0.4937 0.4888 0.5322 880.0 0.1572 0.0322 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 126.0 0.0554 -0.073 somatic
39 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 86852982 95929312 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 766 75 0.224 0.2019 0.559 2342.0 0.1456 0.0288 3 1 amp 1;2 0.2367 0.2367 1.0 2 -0.526 15.09 0.0626 0.0082 somatic
40 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 95935416 95948603 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 12 45 -0.0092 -0.0097 0.6401 1305.0 0.7491 0.4422 2 0 cn-loh 1;2 0.2367 0.2367 1.0 2 -0.526 8.68 -0.0092 0.0712 somatic
41 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 95948543 95950854 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3 26 0.5844 0.3149 0.9397 1669.1 2.1988 4.8334 6 0 amp 1;2 0.2367 0.2367 1.0 2 -0.526 32.56 0.0253 1.6758 somatic
42 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 95951300 95982349 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 21 12 0.0011 0.0744 0.7128 511.7 0.6141 0.3799 3 0 amp 1;2 0.2367 0.2367 1.0 2 -0.526 7.07 -0.1603 0.2161 somatic
43 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr2 95982289 241873273 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 21815 2421 0.4156 0.4115 0.5372 884.0 0.1753 0.0434 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 143.46 -0.0227 -0.0529 somatic
44 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr20 87677 58699297 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 8814 1057 1.2772 1.2805 0.5302 1728.0 0.1869 0.0395 14 6 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 278.99 0.0022 -0.0945 somatic
45 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr20 58700947 64273595 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1588 244 1.105 1.1168 0.525 2109.0 0.1559 0.028 12 6 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 102.46 -0.0216 0.0827 somatic
46 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr21 5117108 30881520 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 927 133 0.2991 0.3121 0.5873 657.0 0.3043 0.1198 4 1 amp 1 0.1812 0.2367 0.7654 2 -0.526 22.88 0.0589 0.0125 somatic
47 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr21 30881455 44217173 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2737 349 0.5775 0.577 0.5281 1469.0 0.102 0.0172 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 70.38 0.0184 0.0917 somatic
48 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr21 44217773 46213881 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 717 180 0.2787 0.2685 0.5378 1162.0 0.1601 0.0301 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 17.81 -0.0681 -0.0146 somatic
49 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr21 46215178 46664423 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 288 46 0.5594 0.5927 0.5322 900.3 0.1792 0.0272 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 22.14 0.0003 0.1024 somatic
50 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr22 15528158 21974541 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1531 257 0.4534 0.4556 0.5325 1283.0 0.1301 0.021 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 41.46 0.0151 -0.0672 somatic
51 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr22 21975624 23838660 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1095 144 0.0576 0.1049 0.5345 8714.0 0.1071 0.0177 4 1 amp 2 0.0555 0.2367 0.2346 2 -0.526 5.73 -0.0204 0.0244 somatic
52 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr22 23838646 36871740 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2791 361 0.5289 0.5522 0.5297 1250.0 0.1503 0.0274 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 65.13 -0.0302 0.0964 somatic
53 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr22 36872284 36938654 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 116 18 0.0497 0.0162 0.5139 3561.3 0.1081 0.0111 3 1 amp 2 0.0555 0.2367 0.2346 2 -0.526 1.31 0.0102 -0.0118 somatic
54 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr22 36991142 50782316 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3876 608 0.4405 0.4523 0.5305 1239.0 0.17 0.036 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 64.04 0.0022 -0.0756 somatic
55 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 319726 3056223 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 139 20 -0.0264 0.0277 0.5446 562.0 0.2566 0.0803 2 0 cn-loh 2 0.0555 0.2367 0.2346 2 -0.526 1.68 -0.0264 0.0341 somatic
56 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 3056156 12662619 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2162 185 0.6459 0.6705 0.5512 2032.0 0.1656 0.0368 7 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 70.1 -0.0247 0.0389 somatic
57 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 12662619 73624882 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 10921 915 0.4589 0.4736 0.535 1133.0 0.2107 0.0617 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 111.84 0.0206 -0.0586 somatic
58 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 74264388 98283829 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 744 117 0.1032 0.0864 0.5738 762.0 0.1649 0.0289 5 0 amp 2 0.0555 0.2367 0.2346 2 -0.526 9.43 -0.0122 0.0108 somatic
59 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 98353856 182964000 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 10546 1090 0.4167 0.4122 0.5328 744.0 0.2066 0.0601 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 99.84 -0.0216 -0.073 somatic
60 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr3 182963951 198169878 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3231 519 0.5185 0.531 0.5273 1169.0 0.1388 0.0238 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 68.7 -0.0406 0.086 somatic
61 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 53399 1930824 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 669 95 0.3046 0.2806 0.5361 1043.0 0.1836 0.037 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 18.53 -0.0422 -0.0227 somatic
62 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 1935097 42049516 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3977 561 0.4742 0.4754 0.5337 872.0 0.1987 0.0446 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 69.81 0.0359 -0.0671 somatic
63 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 42060137 61587442 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1823 189 0.3172 0.3374 0.5358 684.5 0.1972 0.0443 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 31.71 -0.0296 -0.0297 somatic
64 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 61676792 70234200 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 736 98 0.017 0.0712 0.5343 448.5 0.2689 0.0938 2 0 cn-loh 2 0.0555 0.2367 0.2346 2 -0.526 2.54 0.017 -0.0114 somatic
65 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 70244763 182796813 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 10074 1038 0.3652 0.3791 0.5359 598.0 0.2122 0.0587 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 85.66 0.0184 -0.0315 somatic
66 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr4 182799604 190027226 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 991 142 0.5828 0.6163 0.5367 1003.0 0.1538 0.0353 6 3 amp 1;2 0.2367 0.2367 1.0 2 -0.526 42.81 0.0237 0.1219 somatic
67 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr5 92183 81394163 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 7883 1019 0.4275 0.4186 0.5328 754.0 0.1804 0.0449 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 88.61 -0.0108 -0.0728 somatic
68 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr5 81420443 131159554 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3558 398 0.3142 0.3173 0.5419 539.2 0.2136 0.0548 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 44.03 -0.0326 -0.0091 somatic
69 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr5 131159508 181367550 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 8971 1131 0.4752 0.4792 0.5353 1128.0 0.1781 0.036 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 105.09 0.0369 -0.0574 somatic
70 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 304553 411129 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 96 16 0.708 0.7093 0.6228 23503.0 0.4877 0.2438 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 16.79 0.0374 0.0425 somatic
71 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 411129 26501363 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2703 260 1.0097 1.0141 0.6338 1329.5 0.5398 0.3246 11 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 123.69 -0.0365 -0.0629 somatic
72 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 26501583 32214183 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2669 549 0.9051 0.9091 0.6227 2429.0 0.4637 0.2373 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 111.94 0.0346 0.0915 somatic
73 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 32214183 32812827 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 173 185 0.7484 0.7259 0.5964 11017.2 0.4772 0.239 8 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 25.92 -0.0256 0.1043 somatic
74 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 32812827 33005212 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 199 52 0.9876 1.0141 0.5945 2972.5 0.3739 0.1514 10 4 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 32.99 0.0266 0.1236 somatic
75 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 33005452 33008301 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 24 8 0.6726 0.7111 0.6463 16619.5 0.5658 0.3252 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 8.62 0.002 0.1429 somatic
76 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 33008197 33067992 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 11 45 1.1921 1.0484 0.7586 8463.2 0.799 0.7272 13 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 20.04 -0.0106 0.1348 somatic
77 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 33067992 33068712 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 7 32 0.682 0.7461 0.8146 20073.2 1.1657 1.293 7 0 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 19.93 0.0114 0.3207 somatic
78 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 33068684 33089738 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 63 167 0.9083 0.8999 0.728 22565.2 0.7974 0.5345 9 1 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 33.98 0.0378 0.0021 somatic
79 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 33163609 46080298 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3730 408 0.9377 0.9362 0.6301 1398.0 0.5502 0.3242 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 135.36 -0.0233 0.0151 somatic
80 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 46139584 105159879 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 5183 444 0.7449 0.7503 0.6246 826.0 0.5209 0.3033 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 126.96 -0.0291 -0.0871 somatic
81 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 105161432 112065070 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1330 96 0.976 0.9661 0.6339 859.5 0.5214 0.282 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 83.64 0.015 0.0255 somatic
82 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 112068188 127119629 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1586 173 0.7305 0.7583 0.6233 765.5 0.4644 0.2392 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 69.22 -0.0435 -0.0937 somatic
83 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 127119629 127155458 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 249 22 0.6368 0.6234 0.6208 10568.0 0.4839 0.2367 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 23.97 -0.0338 0.0315 somatic
84 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 127195816 129491990 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 290 31 0.6427 0.6627 0.622 1546.3 0.4566 0.2271 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 26.2 -0.0279 0.024 somatic
85 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 129491957 149702367 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2837 207 0.8947 0.8862 0.6221 808.0 0.5012 0.2782 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 111.96 0.0242 0.0771 somatic
86 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 149708115 151944401 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 471 60 0.9718 1.0286 0.6338 2200.0 0.5741 0.3381 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 49.99 0.0108 0.0353 somatic
87 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 151944308 152148265 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 154 27 0.6174 0.6936 0.6308 14701.0 0.5403 0.3003 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 18.94 -0.0532 0.0754 somatic
88 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr6 152148256 170584636 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2684 333 0.9753 0.9803 0.6288 1430.0 0.5272 0.3008 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 119.48 0.0143 0.0097 somatic
89 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 193154 5605503 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1199 231 0.7756 0.7843 0.6446 1495.5 0.5878 0.3558 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 65.71 0.0016 0.0063 somatic
90 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 5622863 11051794 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 675 75 1.0346 1.0673 0.6452 1175.5 0.4906 0.2801 11 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 63.59 -0.0116 -0.0148 somatic
91 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 11061725 16406388 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 986 148 0.3605 0.3943 0.5349 5930.0 0.1167 0.0279 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 26.58 0.0137 -0.0132 somatic
92 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 16421022 20704857 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 373 40 0.7636 0.7884 0.6024 860.0 0.4474 0.2366 8 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 34.78 -0.0104 0.1097 somatic
93 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 20722960 50327758 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3376 498 0.9036 0.8891 0.636 1071.0 0.5459 0.3232 9 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 125.24 0.0331 -0.1377 somatic
94 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 50368005 55146667 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 240 25 0.9441 0.9789 0.606 2901.0 0.499 0.254 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 34.36 -0.0169 -0.0805 somatic
95 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 55146554 55187216 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 281 41 0.6965 0.7345 0.6533 28923.0 0.6523 0.4316 7 1 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 28.74 0.0259 -0.152 somatic
96 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 55187216 78019296 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1757 239 0.95 0.9449 0.6332 1387.7 0.5415 0.3139 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 94.53 -0.011 0.0283 somatic
97 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 78019296 78019518 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 3 4 0.8692 0.8561 0.6259 18150.0 0.7825 0.6097 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 4.23 -0.0013 0.1154 somatic
98 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 78019416 91874661 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1383 136 0.5904 0.6109 0.6274 801.0 0.5131 0.2976 6 1 amp 1;2 0.2367 0.2367 1.0 2 -0.526 52.8 0.0313 -0.1732 somatic
99 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 91874635 100884254 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2357 129 0.9399 0.9358 0.6606 1055.0 0.6438 0.4386 10 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 107.48 -0.0211 -0.1233 somatic
100 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 100884351 102201542 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 457 110 0.8683 0.8724 0.633 3866.5 0.3377 0.1694 9 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 45.1 -0.0022 -0.1391 somatic
101 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 102201533 102282804 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 134 17 0.6994 0.7357 0.6252 24673.0 0.5519 0.3065 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 19.45 0.0288 0.0529 somatic
102 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 102282995 116775952 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1874 135 0.8044 0.808 0.6135 860.0 0.4644 0.2439 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 81.84 0.0304 -0.1336 somatic
103 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 116775952 116803497 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 59 13 1.009 1.0309 0.679 22381.0 0.6793 0.4606 11 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 19.08 -0.0372 -0.1062 somatic
104 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 116862560 127386181 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 921 71 0.6309 0.6438 0.6271 1001.5 0.5203 0.2824 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 45.58 -0.0397 0.0409 somatic
105 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 127391469 129189538 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 503 96 0.9394 0.9317 0.6206 1966.0 0.518 0.2951 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 50.19 -0.0216 -0.0221 somatic
106 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 129203367 129213565 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 52 16 0.6465 0.6758 0.6248 16520.0 0.548 0.3054 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 11.82 -0.0241 0.0501 somatic
107 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr7 129225026 159144810 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 5349 607 0.914 0.9177 0.6336 1477.5 0.5033 0.2781 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 158.4 0.0435 0.1336 somatic
108 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 166085 17565146 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1292 297 0.8098 0.8099 0.6376 1397.0 0.555 0.3329 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 71.15 0.0358 -0.0248 somatic
109 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 17577217 31639822 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 2340 357 0.9341 0.9421 0.6244 1104.5 0.506 0.2867 10 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 107.24 -0.0269 -0.012 somatic
110 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 31639822 32773817 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1278 158 0.6045 0.6134 0.62 11031.5 0.4921 0.2406 6 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 52.21 0.0454 0.1579 somatic
111 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 32773817 38270153 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 507 38 0.892 0.8621 0.6301 953.5 0.5255 0.2935 9 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 47.28 0.0215 0.1135 somatic
112 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 38270153 38460630 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 499 31 0.811 0.8412 0.6346 15826.0 0.5058 0.2627 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 42.73 0.037 -0.0228 somatic
113 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 38460630 38528441 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 61 16 0.6164 0.5993 0.6333 47447.0 0.5342 0.2813 7 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 12.29 -0.0542 0.089 somatic
114 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 38528510 48008497 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1431 89 1.0157 1.0272 0.6373 1365.5 0.4686 0.2365 11 3 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 90.16 -0.0305 -0.0475 somatic
115 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr8 48042995 145054212 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 9807 1084 0.7793 0.7887 0.6249 970.0 0.5157 0.2969 8 2 high-amp 1;2 0.2367 0.2367 1.0 2 -0.526 183.32 0.0053 -0.0837 somatic
116 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr9 17350 88652052 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 8449 868 0.4168 0.4142 0.5318 982.8 0.1396 0.0294 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 89.38 -0.0215 -0.0732 somatic
117 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr9 88990988 133422555 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 8385 944 0.5083 0.511 0.532 999.0 0.1642 0.0363 5 2 amp 1;2 0.2367 0.2367 1.0 2 -0.526 108.51 0.07 -0.0722 somatic
118 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr9 133423080 136493954 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 961 148 0.3487 0.3482 0.5316 836.0 0.1061 0.0242 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 25.3 0.0019 -0.0437 somatic
119 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr9 136494376 136523975 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 343 2 -0.1208 -0.1109 0.5245 49281.0 0.0513 0.0017 1 0 del 1 0.1812 0.2367 0.7654 2 -0.526 5.2 0.0162 0.0 somatic
120 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chr9 136523905 138231128 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1076 117 0.3206 0.3176 0.5284 1497.5 0.1207 0.0201 5 2 amp 1 0.1812 0.2367 0.7654 2 -0.526 24.57 -0.0262 -0.0496 somatic
121 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chrX 2853959 21432731 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 1749 0 -0.3747 -0.3701 4 0 amp 1 0.1812 0.2367 0.7654 2 -0.526 36.45 -0.6149 0.0 somatic
122 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chrX 21432695 155545278 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 14802 33 -0.5861 -0.5829 0.5933 1390.5 0.2879 0.0838 3 0 amp 1 0.1812 0.2367 0.7654 2 -0.526 165.91 -0.7112 -0.1528 somatic
123 1136_7H5-T1-TDNA-1_B23NN53LT4_1_vs_1136_7H5-N1-BDNA-1_B23KFG5LT4_1 chrY 2786997 20779689 1136_7H5-T1-TDNA-1_B23NN53LT4_1 1136_7H5-N1-BDNA-1_B23KFG5LT4_1 193 0 1.2789 1.3069 6 0 amp 1;2 0.2367 0.2367 1.0 2 -0.526 41.32 0.7198 0.0 somatic
124 rows