File Info
- Filename
- COLO829_tumor_20pct_rep1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/20_caller_benchmark_revalidation/colo829-modelD-6a21f937/variant_calling/manta_fusion/COLO829_tumor_20pct_rep1/COLO829_tumor_20pct_rep1.manta_fusion.fusion_calls.tsv
- Size
- 939 bytes
- Workflow Run
- sv-benchmark-colo829-modelD-6a21f937
- Published
- Jun 04, 2026 3:53 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| COLO829_tumor_20pct_rep1.manta_fusion | BICC1 | TRHDE | chr10 | 58717662 | chr12 | 72273294 | BND | MantaBND:2:129707:129709:0:0:0:0 | 0.99987295307931 | PASS | 0 | 0 | 0 | 0 | 99.0 | 0.04411764705882353 | 1 | 1 | 0 |
| COLO829_tumor_20pct_rep1.manta_fusion | RARB | TRHDE | chr3 | 25359111 | chr12 | 72273112 | BND | MantaBND:2:129707:129708:0:0:0:1 | 0.9973470196388626 | PASS | 0 | 2 | 0 | 0 | 78.0 | 0.03248862897985705 | 1 | 1 | 0 |
| COLO829_tumor_20pct_rep1.manta_fusion | ARHGAP40 | GOLGA6L2 | chr20 | 38645825 | chr15 | 23440460 | BND | MantaBND:2:144995:144996:0:2:0:0 | 0.08867826313581606 | PASS | 0 | 1765 | 0 | 0 | 44.0 | 0.02090032154340836 | 1 | 1 | 0 |
| COLO829_tumor_20pct_rep1.manta_fusion | MGA | TNIK | chr15 | 41768974 | chr3 | 171096527 | BND | MantaBND:2:146178:146394:0:3:0:0 | 0.018394417121966936 | FAIL | 5 | 0 | 0 | 0 | 36.0 | 0.001367053998632946 | 1 | 1 | 0 |
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