|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
4s |
3s |
0s |
0s |
0 bytes |
176% |
90.7 KB |
11.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
3s |
1s |
0s |
1s |
18.7 MB |
90% |
2.0 MB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_100pct_rep1)
|
3s |
1s |
0s |
1s |
17.0 MB |
99% |
7.9 MB |
308.5 KB |
0 bytes |
316.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_100pct_rep2)
|
3s |
1s |
0s |
1s |
17.0 MB |
102% |
7.9 MB |
320.3 KB |
0 bytes |
332.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_10pct_rep1)
|
3s |
1s |
0s |
1s |
16.8 MB |
97% |
7.9 MB |
329.8 KB |
0 bytes |
340.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_10pct_rep2)
|
3s |
1s |
0s |
1s |
16.9 MB |
102% |
8.0 MB |
335.4 KB |
0 bytes |
344.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_20pct_rep1)
|
3s |
1s |
0s |
1s |
17.0 MB |
98% |
8.0 MB |
376.8 KB |
0 bytes |
384.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_20pct_rep2)
|
3s |
1s |
0s |
1s |
17.0 MB |
99% |
7.9 MB |
324.0 KB |
0 bytes |
332.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_50pct_rep1)
|
3s |
1s |
0s |
1s |
16.9 MB |
100% |
8.0 MB |
357.9 KB |
0 bytes |
368.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_50pct_rep2)
|
4s |
1s |
0s |
2s |
16.9 MB |
100% |
7.9 MB |
311.8 KB |
0 bytes |
324.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_75pct_rep1)
|
4s |
2s |
0s |
1s |
17.0 MB |
97% |
8.0 MB |
366.7 KB |
0 bytes |
376.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_ANNOTATE (COLO829_tumor_75pct_rep2)
|
4s |
1s |
0s |
2s |
15.4 MB |
97% |
8.0 MB |
341.0 KB |
0 bytes |
348.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_100pct_rep1)
|
18m 8s |
3s |
13m 34s |
4m 30s |
2.0 GB |
1280% |
643.0 GB |
210.7 MB |
188.8 GB |
208.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_100pct_rep2)
|
19m 53s |
3s |
14m 34s |
5m 15s |
2.0 GB |
1288% |
729.0 GB |
213.9 MB |
210.4 GB |
211.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_10pct_rep1)
|
22m 21s |
3s |
16m 34s |
5m 43s |
2.0 GB |
1298% |
847.6 GB |
216.9 MB |
229.7 GB |
213.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_10pct_rep2)
|
22m 2s |
3s |
16m 19s |
5m 39s |
2.0 GB |
1298% |
866.6 GB |
216.0 MB |
225.5 GB |
212.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_20pct_rep1)
|
25m 2s |
3s |
18m 19s |
6m 39s |
2.1 GB |
1262% |
907.2 GB |
220.4 MB |
273.3 GB |
215.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_20pct_rep2)
|
19m 18s |
3s |
14m 19s |
4m 55s |
2.0 GB |
1308% |
706.4 GB |
213.4 MB |
201.5 GB |
210.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_50pct_rep1)
|
27m 40s |
3s |
20m 34s |
7m 2s |
2.1 GB |
1295% |
1.2 TB |
220.6 MB |
278.3 GB |
215.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA_FUSION:MANTA_FUSION_CALL (COLO829_tumor_50pct_rep2)
|
23m 29s |
3s |
17m 19s |
6m 6s |
2.0 GB |
1266% |
883.2 GB |
218.5 MB |
246.0 GB |
214.2 MB |
1 |