succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (COLO829_tumor_75pct_rep1) 22m 27s 3s 15m 42s 6m 42s 1.8 GB 1195% 542.6 GB 3.1 GB 147.8 GB 3.1 GB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (COLO829_tumor_75pct_rep2) 20m 1s 3s 13m 56s 6m 2s 1.7 GB 1203% 485.4 GB 3.1 GB 132.7 GB 3.1 GB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829BL_c_01_gDNA_0001_A237FLHLT3_1) 13s 11s 0s 1s 13.1 MB 92% 4.8 MB 462 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_1) 2s 1s 0s 0s 13.1 MB 105% 5.4 MB 464 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_10) 2s 1s 0s 0s 13.0 MB 121% 5.6 MB 464 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_2) 3s 1s 0s 1s 13.0 MB 121% 5.8 MB 465 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_3) 14s 12s 0s 1s 12.8 MB 86% 5.9 MB 462 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_4) 13s 11s 0s 1s 13.1 MB 101% 5.8 MB 465 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_5) 3s 1s 0s 1s 13.1 MB 92% 5.6 MB 463 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_6) 3s 2s 0s 0s 13.2 MB 118% 5.7 MB 466 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_7) 12s 10s 0s 1s 13.2 MB 101% 5.7 MB 464 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_8) 3s 2s 0s 0s 13.0 MB 90% 5.5 MB 461 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (COLO829_c_0001_gDNA_0001_B23H2NLLT4_9) 12s 11s 0s 0s 13.0 MB 102% 5.6 MB 464 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VARIANT_QC_TO_CSV (variant_qc_csv) 3s 1s 0s 1s 17.7 MB 96% 1.7 MB 479 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep1;manta) 2s 1s - - 3.3 MB 3777% 154.8 KB 3.8 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep1;manta) 2s 1s - - 18.4 MB 3666% 140.8 KB 3.3 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep1;manta_fusion) 2s 1s - - 19.8 MB 4305% 150.6 KB 3.5 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep2;manta) 3s 1s - - 3.2 MB 4004% 140.6 KB 3.3 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep2;manta) 3s 1s - - 18.8 MB 4044% 151.4 KB 3.9 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_100pct_rep2;manta_fusion) 3s 2s - - 3.3 MB 4204% 152.8 KB 3.5 KB 0 bytes 8.0 KB 1
84 items found |
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