.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_10pct_rep2;manta_fusion)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/ba7ac72f82ffbeb2d7c2d8a088fc02/.command.log
Size: 495 bytes
Task: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (COLO829_tumor_10pct_rep2;manta_fusion)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/4ce51353e93b626cd1f3d14c33000a/COLO829_tumor_10pct_rep2.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/ba7ac72f82ffbeb2d7c2d8a088fc02/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/ba7ac72f82ffbeb2d7c2d8a088fc02/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header