File Info
- Filename
- samplesheet_input.csv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/20_caller_benchmark_revalidation/hd789-modelD-6a21f937/samplesheets/samplesheet_input.csv
- Size
- 44.7 KB
- Workflow Run
- sv-benchmark-hd789-modelD-6a21f937
- Published
- Jun 04, 2026 3:25 PM
Content
View in new tab| normal_sample_id,normal_sample_bam,normal_sample_bai,tumor_sample_id,tumor_sample_bam,tumor_sample_bai,id |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00527_0052_A23KYMYLT4__5b7749b--20260306-234544/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00527_0052_A23KYMYLT4__5b7749b--20260306-234544/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1/FFPE_HD789_01_gDNA_0001_A23KYMYLT4_1.recalibrated.bam.bai,pos_somatic_000 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1/FFPE_HD789_01_gDNA_0001_A23L5NJLT4_1.recalibrated.bam.bai,pos_somatic_001 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20251222_LH00527_0043_B23FC2GLT4__5d8e7d70--20260228-200340/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20251222_LH00527_0043_B23FC2GLT4__5d8e7d70--20260228-200340/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47/FFPE_HD789_01_gDNA_0001_23FC2GLT4_s47.recalibrated.bam.bai,pos_somatic_002 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_gDNA_0001_23K7YCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0050_B23K7YCLT4__5d8e7d70--20260228-200338/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0050_B23K7YCLT4__5d8e7d70--20260228-200338/alignments/recalibrated/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1/FFPE_HD789_01_gDNA_0001_23K7YCLT4_1.recalibrated.bam.bai,pos_somatic_003 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0057_A23L3H3LT4__5d8e7d70--20260301-121010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0057_A23L3H3LT4__5d8e7d70--20260301-121010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1/FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1.recalibrated.bam.bai,pos_somatic_004 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0060_A23MHLYLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0060_A23MHLYLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1/FFPE_HD789_01_p1_gDNA_0001_A23MHLYLT4_1.recalibrated.bam.bai,pos_somatic_005 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0061_B23MHVMLT4__5b7749bb--20260306-132009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0061_B23MHVMLT4__5b7749bb--20260306-132009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MHVMLT4_1.recalibrated.bam.bai,pos_somatic_006 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00527_0062_B23MMVMLT4__5d7f62c6--20260315-091014/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00527_0062_B23MMVMLT4__5d7f62c6--20260315-091014/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1/FFPE_HD789_01_p1_gDNA_0001_B23MMVMLT4_1.recalibrated.bam.bai,pos_somatic_007 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0062_A23MHVGLT4__5b7749bb--20260306-132010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260303_LH00519_0062_A23MHVGLT4__5b7749bb--20260306-132010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1/FFPE_HD789_01_p1_gDNA_0002_A23MHVGLT4_1.recalibrated.bam.bai,pos_somatic_008 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0071_B23KCGWLT4__d7a6b981--20260322-105015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0071_B23KCGWLT4__d7a6b981--20260322-105015/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23KCGWLT4_1.recalibrated.bam.bai,pos_somatic_009 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0056_B23MHWGLT4__444aee1e--20260301-135529/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00527_0056_B23MHWGLT4__444aee1e--20260301-135529/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1/FFPE_HD789_01_p1_gDNA_0002_B23MHWGLT4_1.recalibrated.bam.bai,pos_somatic_010 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23KCGYLT4_1.recalibrated.bam.bai,pos_somatic_011 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0068_A23MCTVLT4__d7a6b981--20260325-072016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0068_A23MCTVLT4__d7a6b981--20260325-072016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MCTVLT4_1.recalibrated.bam.bai,pos_somatic_012 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0064_A23MHTWLT4__d7a6b981--20260318-095010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0064_A23MHTWLT4__d7a6b981--20260318-095010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0003_A23MHTWLT4_1.recalibrated.bam.bai,pos_somatic_013 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0063_B23MHY7LT4__d7a6b981--20260318-094010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00527_0063_B23MHY7LT4__d7a6b981--20260318-094010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1/FFPE_HD789_01_p1_gDNA_0004_A23MHTWLT4_1.recalibrated.bam.bai,pos_somatic_014 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0070_B23KFCWLT4__d7a6b981--20260320-092016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0070_B23KFCWLT4__d7a6b981--20260320-092016/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23KFCWLT4_1.recalibrated.bam.bai,pos_somatic_015 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0069_B23MCVGLT4__d7a6b981--20260325-072017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00527_0069_B23MCVGLT4__d7a6b981--20260325-072017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1/FFPE_HD789_01_p1_gDNA_0004_B23MCVGLT4_1.recalibrated.bam.bai,pos_somatic_016 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0021/20260113_LH00527_0046_A23FG3YLT4__aa3fd045--20260225-014632/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0021/20260113_LH00527_0046_A23FG3YLT4__aa3fd045--20260225-014632/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23FG3YLT4_1.recalibrated.bam.bai,pos_somatic_017 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0242_A23H5VJLT4__aa3fd045--20260224-223946/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0242_A23H5VJLT4__aa3fd045--20260224-223946/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23H5VJLT4_1.recalibrated.bam.bai,pos_somatic_018 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23LGTTLT4_1.recalibrated.bam.bai,pos_somatic_019 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0248_A23MHKLLT4__aa3fd04--20260223-202122/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0248_A23MHKLLT4__aa3fd04--20260223-202122/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MHKLLT4_1.recalibrated.bam.bai,pos_somatic_020 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260223_LH00166_0250_A23MJ3TLT4__aa3fd045--20260225-060009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260223_LH00166_0250_A23MJ3TLT4__aa3fd045--20260225-060009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23MJ3TLT4_1.recalibrated.bam.bai,pos_somatic_021 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0265_A23NYHCLT4__5d7f62c6--20260316-162010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0265_A23NYHCLT4__5d7f62c6--20260316-162010/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1/FFPE_HD789_01_p1_gDNA_0005_A23NYHCLT4_1.recalibrated.bam.bai,pos_somatic_022 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0243_B23KKT2LT4__aa3fd045--20260224-224017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0024/20260215_LH00166_0243_B23KKT2LT4__aa3fd045--20260224-224017/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23KKT2LT4_1.recalibrated.bam.bai,pos_somatic_023 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0234_B23LG35LT4__aa3fd045--20260226-233302/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0234_B23LG35LT4__aa3fd045--20260226-233302/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG35LT4_1.recalibrated.bam.bai,pos_somatic_024 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260206_LH00166_0240_B23LG3FLT4__8aacaa71--20260305-220752/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260206_LH00166_0240_B23LG3FLT4__8aacaa71--20260305-220752/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23LG3FLT4_1.recalibrated.bam.bai,pos_somatic_025 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0249_B23MHJYLT4__d07803d4--20260223-183627/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260220_LH00166_0249_B23MHJYLT4__d07803d4--20260223-183627/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23MHJYLT4_1.recalibrated.bam.bai,pos_somatic_026 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00166_0255_B23NLHKLT4__5d8e7d70--20260301-080009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260227_LH00166_0255_B23NLHKLT4__5d8e7d70--20260301-080009/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NLHKLT4_1.recalibrated.bam.bai,pos_somatic_027 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0266_B23NYJ5LT4__5d7f62c6--20260315-121013/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00166_0266_B23NYJ5LT4__5d7f62c6--20260315-121013/alignments/recalibrated/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1/FFPE_HD789_01_p1_gDNA_0005_B23NYJ5LT4_1.recalibrated.bam.bai,pos_somatic_028 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1/FFPE_HD789_01_p2_gDNA_01_A23KC75LT4_1.recalibrated.bam.bai,pos_somatic_029 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0068_A23MHKVLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0068_A23MHKVLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHKVLT4_1.recalibrated.bam.bai,pos_somatic_030 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0065_A23MHWWLT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0065_A23MHWWLT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1/FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1.recalibrated.bam.bai,pos_somatic_031 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0065_B23KCHGLT4__5d7f62c6--20260315-113014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0065_B23KCHGLT4__5d7f62c6--20260315-113014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1/FFPE_HD789_01_p2_gDNA_01_B23KCHGLT4_1.recalibrated.bam.bai,pos_somatic_032 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260302_LH00527_0058_B23MHVHLT4__2cd6b81d--20260304-091011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260302_LH00527_0058_B23MHVHLT4__2cd6b81d--20260304-091011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVHLT4_1.recalibrated.bam.bai,pos_somatic_033 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0061_B23MHVNLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260311_LH00527_0061_B23MHVNLT4__5d7f62c6--20260313-122016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1/FFPE_HD789_01_p2_gDNA_01_B23MHVNLT4_1.recalibrated.bam.bai,pos_somatic_034 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0066_A23KFCVLT4__5d7f62c6--20260315-112014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260313_LH00519_0066_A23KFCVLT4__5d7f62c6--20260315-112014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1/FFPE_HD789_01_p2_gDNA_02_A23KFCVLT4_1.recalibrated.bam.bai,pos_somatic_035 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0066_B23KCK5LT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00527_0066_B23KCK5LT4__d7a6b981--20260320-133016/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1/FFPE_HD789_01_p2_gDNA_02_B23KCK5LT4_1.recalibrated.bam.bai,pos_somatic_036 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0067_B23MF2NLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260316_LH00519_0067_B23MF2NLT4__d7a6b981--20260318-093010/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1/FFPE_HD789_01_p2_gDNA_02_B23MF2NLT4_1.recalibrated.bam.bai,pos_somatic_037 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1/FFPE_HD789_01_p2_gDNA_03_A23GW7HLT4_1.recalibrated.bam.bai,pos_somatic_038 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00995_0017_A23MYM7LT4__5b7749bb--20260306-133014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00995_0017_A23MYM7LT4__5b7749bb--20260306-133014/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1/FFPE_HD789_01_p2_gDNA_03_A23MYM7LT4_1.recalibrated.bam.bai,pos_somatic_039 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260309_LH00166_0263_A23NLJYLT4__5d7f62c6--20260311-084011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260309_LH00166_0263_A23NLJYLT4__5d7f62c6--20260311-084011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1/FFPE_HD789_01_p2_gDNA_03_A23NLJYLT4_1.recalibrated.bam.bai,pos_somatic_040 |
| NA12878_c_0002_gDNA_0005_B23KYWJLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0055_B23KYWJLT4__5d8e7d70--20260227-170008/alignments/recalibrated/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.recalibrated.bam.bai,FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0260_B23NYHYLT4__2cd6b81d--20260306-064011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0260_B23NYHYLT4__2cd6b81d--20260306-064011/alignments/recalibrated/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1/FFPE_HD789_01_p2_gDNA_03_B23NYHYLT4_1.recalibrated.bam.bai,pos_somatic_041 |
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