Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/24ce53d9c45d882da9c7a4e198bf94/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/a7075299e7804bea60836ae8891352/pos_somatic_018.manta_fusion.somatic_sv.scored.vcf.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/24ce53d9c45d882da9c7a4e198bf94/.command.run ==> STAGING COMPLETE (3 inputs) [W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header [W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header