.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (pos_somatic_035;manta_fusion)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/b0b7079fc9f344b2b107b7e5c6d07f/.command.log
Size: 561 bytes
Task: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (pos_somatic_035;manta_fusion)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/b0b7079fc9f344b2b107b7e5c6d07f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/1442554df1b29b2dbbf94b50833576/pos_somatic_035.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/b0b7079fc9f344b2b107b7e5c6d07f/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header