File Info
- Filename
- seracare_20pct_rep1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/20_caller_benchmark_revalidation/seracare-modelD-6a21f937/variant_calling/manta_fusion/seracare_20pct_rep1/seracare_20pct_rep1.manta_fusion.fusion_calls.tsv
- Size
- 933 bytes
- Workflow Run
- sv-benchmark-seracare-modelD-6a21f937
- Published
- Jun 04, 2026 4:40 PM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| seracare_20pct_rep1.manta_fusion | CD74 | ROS1 | chr5 | 150404544 | chr6 | 117326072 | BND | MantaBND:1:2225:7226:0:2:0:1 | 0.9992288212478283 | PASS | 3 | 1926 | 0 | 1 | 536.0 | 0.040396621373485125 | 1 | 1 | 0 |
| seracare_20pct_rep1.manta_fusion | NCOA4 | RET | chr10 | 46011572 | chr10 | 43115145 | BND | MantaBND:1:40548:224631:0:1:0:0 | 0.9380365021471638 | PASS | 0 | 5 | 0 | 1 | 314.0 | 0.025835866261398176 | 1 | 0 | 0 |
| seracare_20pct_rep1.manta_fusion | FGFR3 | TACC3 | chr4 | 1806973 | chr4 | 1736003 | DUP | MantaDUP:TANDEM:1:1708:100034:0:2:0 | 0.7699702396198908 | PASS | 18 | 0 | 0 | 1 | 429.0 | 0.027594305005137237 | 1 | 0 | 0 |
| seracare_20pct_rep1.manta_fusion | MUC3A | . | chr7 | 100956133 | chrUn_JTFH01000054v1_decoy | 3922 | BND | MantaBND:1:152191:180278:18:0:0:0 | 0.0010498936202496681 | FAIL | 332 | 0 | 0 | 0 | 156.0 | 0.04142692750287687 | 1 | 1 | 0 |
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