.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (seracare_10pct_rep1;manta_fusion)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/4b60fdfd0b8f0ae457d5066f4df5fe/.command.log
Size: 565 bytes
Task: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (seracare_10pct_rep1;manta_fusion)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/24c3659d9950237122ba5feb2c3fae/seracare_10pct_rep1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/4b60fdfd0b8f0ae457d5066f4df5fe/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/4b60fdfd0b8f0ae457d5066f4df5fe/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header