.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (seracare_75pct_rep1;manta_fusion)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/474eff1388731a03a5f169aa36a881/.command.log
Size: 565 bytes
Task: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (seracare_75pct_rep1;manta_fusion)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/474eff1388731a03a5f169aa36a881/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/026f868fe4e0992f1786e71e8ea388/seracare_75pct_rep1.manta_fusion.somatic_sv.scored.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/474eff1388731a03a5f169aa36a881/.command.run
==> STAGING COMPLETE (3 inputs)

[W::vcf_parse_filter] FILTER 'FilteredPreScore' is not defined in the header
[W::vcf_parse_filter] FILTER 'LowFusionScore' is not defined in the header