.command.log - Workdir - NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (FFPE_ref_01_gDNA_pool_01_A23LGTTLT4_4)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/3b439c6845ed679e696d4adbf4de2c/.command.log
Size: 520 bytes
Task: NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (FFPE_ref_01_gDNA_pool_01_A23LGTTLT4_4)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240/alignments/recalibrated/FFPE_ref_01_gDNA_pool_01_A23LGTTLT4_4/FFPE_ref_01_gDNA_pool_01_A23LGTTLT4_4.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/3b439c6845ed679e696d4adbf4de2c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/3b439c6845ed679e696d4adbf4de2c/.command.run
==> STAGING COMPLETE (3 inputs)