.command.err - Workdir - NIPT_CALLING:NIPT_CALL_VARIANTS (2026-0071_HG00733_HG00732_pure_fetal_shard_0020)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/65ebcfbebd2d8e9244ea8d0b074ff0/.command.err
Size: 284 bytes
Task: NIPT_CALLING:NIPT_CALL_VARIANTS (2026-0071_HG00733_HG00732_pure_fetal_shard_0020)
Attempt

Content

ERROR: required C extension _pairhmm_core.so missing at /tmp/nxf.7Gm7Rav18x/nextflow-bin/src/assembly/_pairhmm_core.so. This is staged from bin/src/assembly/ — verify the submission host's working tree contains both .so files (they are tracked in git as Linux x86-64 ELF binaries).