{
  "sequencing_library_id": "1029_BTW1-T1-TDNA-1_HHJFFDRX7_1",
  "secondary_sequencing_library_id": null,
  "data_source": "tso500_dna",
  "harmonized_software_version": "198bb41c7021831bbb85b464458aae3d09416b97",
  "software_version": null,
  "harmonized_s3_path": "s3://natera-platform-sandbox/platform-users/sgreer/projects/A15_hmz_test/tso500",
  "s3_path": "s3://natera-platform-sandbox/tso500/cgp_tso500dna_exp0008/",
  "s3_path_params": null,
  "s3_path_qc": null,
  "altera_exact_report_details": null,
  "qc": {
    "calculated_sex": "XX",
    "calculated_sex_secondary": null,
    "tumor_normal_correlation": null,
    "tumor_contamination": null,
    "normal_contamination": null,
    "tso500_wetlab_pass": null,
    "tso500_seq_pass": "TRUE"
  },
  "harmonized_input_file_status": {
    "snv_somatic": true,
    "snv_somatic_phased": false,
    "snv_germline": false,
    "cnv": true,
    "sv": false,
    "fusion": false,
    "splice": false,
    "tmb": true,
    "msi": true,
    "hrd_scarhrd": false,
    "hrd_tih": false,
    "hla": false,
    "chip": false
  },
  "harmonized_summary_stats": {
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    "somatic_indel_num": 0,
    "somatic_hotspot_num": 0,
    "somatic_variant_phased_num": null,
    "somatic_cnv_num": 0,
    "somatic_cnv_del_num": 0,
    "somatic_cnv_amp_num": 0,
    "somatic_cnv_segment_num": null,
    "somatic_sv_fusion_num": null,
    "somatic_sv_fusion_actionable_num": null,
    "chip_variant_num": null,
    "germline_snv_num": null,
    "germline_indel_num": null,
    "germline_snv_hrr_num": null,
    "germline_indel_hrr_num": null,
    "germline_cnv_hrr_num": null,
    "tumor_purity": 0.66,
    "tumor_ploidy": 2.06,
    "scarhrd_score": null,
    "scarhrd_status": null,
    "tih_hrd_score": null,
    "tih_hrd_status": null,
    "tso500_gis": 0,
    "tso500_hrd_status": "HRD_neg",
    "msi_status": "MSI-L",
    "msi_score": 2.52,
    "tmb_status": "LOW",
    "tmb_score": 1.6,
    "rna_fusion_total_num": null,
    "rna_fusion_filtered_num": null,
    "tso500_overlap_rna_fusion_total_num": null,
    "rna_fusion_actionable_num": null,
    "rna_fusion_filtered_and_actionable_num": null,
    "tso500_overlap_rna_fusion_filtered_num": null,
    "rna_exon_skipping_total_num": null,
    "rna_exon_skipping_actionable_num": null,
    "tso500_overlap_somatic_snv_num": null,
    "tso500_overlap_somatic_indel_num": null,
    "tso500_overlap_somatic_hotspot_num": null,
    "tso500_overlap_somatic_variant_phased_num": null,
    "tso500_overlap_somatic_cnv_num": null,
    "tso500_overlap_somatic_cnv_del_num": null,
    "tso500_overlap_somatic_cnv_amp_num": null
  }
}