.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0908)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/76/35ab7bdd6d6d6c6f90a204e0ee58f1/.command.log
Size: 932 bytes
Task: MUTECT2_TUMOR_ONLY (LS0908)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/76/35ab7bdd6d6d6c6f90a204e0ee58f1/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: M6V3BDHPR4CC5CBF, host id: zSL3d/zrpjMoEgTm8IKN3+HzdsLilXIvZlfuSB/760lIHvC/HKdXACaq9riYARRzWTUXz4dxrt0=
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa2997485619 hg38.fa: no such file or directory