.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0899)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/5c/fff5060f77f8b0fb95ea746712fb5c/.command.log
Size: 932 bytes
Task: MUTECT2_TUMOR_ONLY (LS0899)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/5c/fff5060f77f8b0fb95ea746712fb5c/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VJY428VNDY3MYC3S, host id: Q0zoU1kIE0Oua4C22ikuynS+JafLCFx349HD9ItupZMw99iVo78NXXPcc2DeP1lAbciH4q8jA30=
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa2448565829 hg38.fa: no such file or directory