.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0890)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/00/2b504175f5c77c9177297177283dc6/.command.log
Size: 952 bytes
Task: MUTECT2_TUMOR_ONLY (LS0890)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/00/2b504175f5c77c9177297177283dc6/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VRTE548PRHH0X2EK, host id: JbPqAF+QD1yJHVZqjgUkaTMtux9xIPgat1vDuYOeYvY2Wj1KNR8XAwEqY9Ts/GRqG/3l55zQTfkuKA/OsjAspKdGMs34m7i+
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa4133684802 hg38.fa: no such file or directory